G2315787


Basic Information

Item Value
gene id G2315787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 29350355 ~ 29350864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2648734
CctctccctctgaccagcagaaacacaaacaattatcacaagaccacttctggttaccttcaccgattccacagcacccaactctgttttcacccaccctgaaaccacaaatggattagccaaaaggcaagggtccacttttccaaaaacttcacttctactgtcacagactcatctttatcctgaccctcAGTGCAAGCCTCATGCTCTGAGAACTTCACCAAGCCTACCATCTCCAATACTTTGACCTCATTCACCTCCTCCTCTGTATTCCAAGTATAcgtctccttatgataatactgcacttcTCCTGACATACATCTTGTTCTTGCCTTCTCAAGAGACGCCATTTAACTGGCTGTCACAATCTCCGTACAATCAGCACAAACCCCTCGAGATGTAGCGCTCAACAGTGCATCCCACTAATAAAGCAGCTGCTTCGTCTTGATGTTGTTCTTCATCAAAAGCTACCGCAACGCTTTTCCATTTCAAACAAGCGCGCTCTTCCAA

Function

NR:

description
retinol dehydrogenase 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2648734 True 510 lncRNA 0.46 1 29350355 29350864

Neighbor

gene id symbol gene type direction distance location
LOC110488226 rpc7l coding upstream 126596 29215636 ~ 29223759 (+)
LOC110488225 LOC106588560 coding upstream 135214 29169839 ~ 29271629 (+)
LOC110489420 LOC106570197 coding upstream 307924 29017561 ~ 29042431 (+)
LOC110489419 ssr2 coding upstream 358696 28983188 ~ 28994465 (+)
LOC110488216 LOC106570190 coding upstream 878995 28468750 ~ 28471360 (+)
LOC118946464 NA coding downstream 15563 29366427 ~ 29369552 (+)
LOC110488231 NA coding downstream 18805 29369669 ~ 29376118 (+)
LOC110488235 LOC106570205 coding downstream 88049 29438913 ~ 29447508 (+)
LOC110488238 LOC106570207 coding downstream 138013 29488877 ~ 29491478 (+)
LOC110488239 krit1 coding downstream 145191 29496055 ~ 29507318 (+)
G2315786 NA non-coding upstream 339 29349460 ~ 29350016 (+)
G2315770 NA non-coding upstream 22185 29326886 ~ 29328170 (+)
G2315734 NA non-coding upstream 48397 29266542 ~ 29301958 (+)
G2315772 NA non-coding downstream 42983 29393847 ~ 29395564 (+)
G2315818 NA non-coding downstream 55211 29406075 ~ 29406429 (+)
G2315788 NA non-coding downstream 64777 29415641 ~ 29418492 (+)
G2315844 NA non-coding downstream 110448 29461312 ~ 29461623 (+)
G2315929 NA non-coding downstream 244674 29595538 ~ 29628782 (+)
G2314987 NA other upstream 646931 28698740 ~ 28703424 (+)
G2314887 NA other upstream 786760 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 1303021 28016566 ~ 28047334 (+)
G2313197 NA other upstream 1856620 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 2147544 27197844 ~ 27202811 (+)
G2316421 NA other downstream 571520 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 1467164 30817937 ~ 30822555 (+)
G2317455 NA other downstream 1482866 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 1746755 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 1871253 31222117 ~ 31223562 (+)

Expression


Co-expression Network