G2316319


Basic Information

Item Value
gene id G2316319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 29706552 ~ 29706846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2649308
tcctatgtcagaatggttcagaaaaTAACTACAGGACGAAGACAACATCAGCAgaagctttggttgcgaatggtatgaactttgaactcttattcactacagaaatGATACatcctagctgttgagttagcaaccgcagctgcaaacgcaggttaggaaggaacagacagagtatctcttctatcacacaacgacgttactacaacgtatccaattgacaaccagagacattcttcaaaggacagaggactcggtttggcaacacggccttccatctaccaccaacctactgaag

Function

NR:

description
uncharacterized protein LOC110518344

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2649308 True 295 lncRNA 0.44 1 29706552 29706846

Neighbor

gene id symbol gene type direction distance location
LOC110488243 ifi44 coding upstream 26357 29672909 ~ 29680195 (+)
LOC110489421 NA coding upstream 49481 29655911 ~ 29657071 (+)
LOC110488242 LOC106570209 coding upstream 185878 29514675 ~ 29520674 (+)
LOC110488239 krit1 coding upstream 199234 29496055 ~ 29507318 (+)
LOC110488238 LOC106570207 coding upstream 215074 29488877 ~ 29491478 (+)
LOC110489422 dus3l coding downstream 23358 29730204 ~ 29745585 (+)
LOC110488250 NA coding downstream 83823 29790669 ~ 29791561 (+)
LOC118946465 NA coding downstream 315209 30022055 ~ 30027657 (+)
LOC118946498 NA coding downstream 324761 30031607 ~ 30032059 (+)
LOC118946528 NA coding downstream 370304 30077150 ~ 30077764 (+)
G2316305 NA non-coding upstream 21236 29685058 ~ 29685316 (+)
G2316299 NA non-coding upstream 42236 29664016 ~ 29664316 (+)
G2316291 NA non-coding upstream 52002 29654286 ~ 29654550 (+)
G2316285 NA non-coding upstream 60106 29646182 ~ 29646446 (+)
G2315929 NA non-coding upstream 77770 29595538 ~ 29628782 (+)
G2316323 NA non-coding downstream 9410 29716256 ~ 29716471 (+)
G2316328 NA non-coding downstream 15531 29722377 ~ 29722596 (+)
G2316335 NA non-coding downstream 21077 29727923 ~ 29728128 (+)
G2316339 NA non-coding downstream 28778 29735624 ~ 29735978 (+)
G2316340 NA non-coding downstream 29299 29736145 ~ 29736396 (+)
G2314987 NA other upstream 1003128 28698740 ~ 28703424 (+)
G2314887 NA other upstream 1142957 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 1659218 28016566 ~ 28047334 (+)
G2313197 NA other upstream 2212817 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 2503741 27197844 ~ 27202811 (+)
G2316421 NA other downstream 215538 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 1111182 30817937 ~ 30822555 (+)
G2317455 NA other downstream 1126884 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 1390773 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 1515271 31222117 ~ 31223562 (+)

Expression


Co-expression Network