G2316350


Basic Information

Item Value
gene id G2316350
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 29812947 ~ 29815841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2649350
GATGTTTTGTCCCCTTTTAGCTCCATAAGGTTCTCAGTGAACCAGACGGCAAACAGTTTCAATTTCCCAACGCCAACTTCATGTAAGTACAACGTCATAACCTTGAACCAACCCGTCTTTCTCAACTGCACTCTTTAGAATTTCTGCAAATTTCATTTAGCTGCTGCTTGTGCAGCTAAACAGGATGAAAGGAACATGTTTAACTCTCACACAAAACCTATTTTTACGTCCACAGTGATGATGGCACTGAAATCACGGCAAACGTGACGTATGTATACAAAGAGGAAGATGTCAACCACCCTAGTGGTTTTCTACAGGAAGTCTTAAAAGTCTCAGGTATGCTGCTTTTGTTACCATACAGTTGTCATTTCTATGTTTATTTATGACAGTGAGTTATCAAACACCATGTAACGTGTATAATACTCAATCTCGAAAACACTTATATATCaatgttatatgacatattaCAAGTTTATAATccctctaaaatgtatttccatttctATTCTAGGTCTCCTGACCACCACTGTtgccccaacaacaacaacaactaccaacACCACACCACTTCCTACCCTTTTGACttcagtgacatcaacaactagGTAAGCAAGATCATTTATTATAATGTTTTCATACTATTCAATTGACACTTTGTCAAACAAGGAACCTTTGCAACAATGAACCATGTATATCCATGCTTGTGTCGTTAACTACTGATGTTTTAATAAAAGCATCCAAAATGTCAACCTTTCTTTAGAAAAGCTCTTTGAGTGCATCAATCGGTCAAAAGGCTTAATATAAATCCAATCCATTATAATTAATGTGCTTGATGAAGGCAAGACCACTAGATTTCTTACATACTTTTTctaattattttaacattttctaAACGTTCTAAACTAAAACAATTTAAATGAGTATAAATTAGCATATAATAACCCACCAAAAATAATATTAACTCTTGAACCGTTCAAGCTAGAGAGACCaaaccaactttcatatgttcaggctatcctttcctatcctatcctatccatcAATCAATCTTTCCATCGACTTTCTTTTTCCaattataaccagtcactaccattactactgcagtgATTACCAATCCTGTAACTTATTTTACAACCatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106598636, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2649350 True 1139 lncRNA 0.35 2 29812947 29815841

Neighbor

gene id symbol gene type direction distance location
LOC110488250 NA coding upstream 21386 29790669 ~ 29791561 (+)
LOC110489422 dus3l coding upstream 67362 29730204 ~ 29745585 (+)
LOC110488243 ifi44 coding upstream 132752 29672909 ~ 29680195 (+)
LOC110489421 NA coding upstream 155876 29655911 ~ 29657071 (+)
LOC110488242 LOC106570209 coding upstream 292273 29514675 ~ 29520674 (+)
LOC118946465 NA coding downstream 206214 30022055 ~ 30027657 (+)
LOC118946498 NA coding downstream 215766 30031607 ~ 30032059 (+)
LOC118946528 NA coding downstream 261309 30077150 ~ 30077764 (+)
LOC118946499 NA coding downstream 283860 30099701 ~ 30100390 (+)
LOC110489425 LOC106569855 coding downstream 292375 29817983 ~ 30125310 (+)
G2316343 NA non-coding upstream 50570 29761730 ~ 29762377 (+)
G2316355 NA non-coding upstream 69659 29743037 ~ 29743288 (+)
G2316340 NA non-coding upstream 76551 29736145 ~ 29736396 (+)
G2316339 NA non-coding upstream 76969 29735624 ~ 29735978 (+)
G2316335 NA non-coding upstream 84819 29727923 ~ 29728128 (+)
G2316421 NA non-coding downstream 108131 29922384 ~ 29931480 (+)
G2316422 NA non-coding downstream 118929 29934770 ~ 29997309 (+)
G2316423 NA non-coding downstream 129726 29945567 ~ 29947714 (+)
G2316478 NA non-coding downstream 236219 30052060 ~ 30055050 (+)
G2314987 NA other upstream 1109523 28698740 ~ 28703424 (+)
G2314887 NA other upstream 1249352 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 1765613 28016566 ~ 28047334 (+)
G2313197 NA other upstream 2319212 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 2610136 27197844 ~ 27202811 (+)
tmem79a LOC106569868 other downstream 1002187 30817937 ~ 30822555 (+)
G2317455 NA other downstream 1017889 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 1281778 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 1406276 31222117 ~ 31223562 (+)

Expression


Co-expression Network