Gene
RNA
| Item | Value |
|---|---|
| gene id | G2316422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 29934770 ~ 29997309 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cell wall protein DAN4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2649451 | False | 417 | lncRNA | 0.44 | 3 | 29934770 | 29997309 |
| TU2649452 | True | 530 | lncRNA | 0.39 | 2 | 29936255 | 29936937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488250 | NA | coding | upstream | 143209 | 29790669 ~ 29791561 (+) |
| LOC110489422 | dus3l | coding | upstream | 189185 | 29730204 ~ 29745585 (+) |
| LOC110488243 | ifi44 | coding | upstream | 254575 | 29672909 ~ 29680195 (+) |
| LOC110489421 | NA | coding | upstream | 277699 | 29655911 ~ 29657071 (+) |
| LOC110488242 | LOC106570209 | coding | upstream | 414096 | 29514675 ~ 29520674 (+) |
| LOC118946465 | NA | coding | downstream | 24746 | 30022055 ~ 30027657 (+) |
| LOC118946498 | NA | coding | downstream | 34298 | 30031607 ~ 30032059 (+) |
| LOC118946528 | NA | coding | downstream | 79841 | 30077150 ~ 30077764 (+) |
| LOC118946499 | NA | coding | downstream | 102392 | 30099701 ~ 30100390 (+) |
| LOC110489425 | LOC106569855 | coding | downstream | 110907 | 29817983 ~ 30125310 (+) |
| G2316421 | NA | non-coding | upstream | 3290 | 29922384 ~ 29931480 (+) |
| G2316352 | NA | non-coding | upstream | 97625 | 29814712 ~ 29837145 (+) |
| G2316349 | NA | non-coding | upstream | 117205 | 29807661 ~ 29817565 (+) |
| G2316350 | NA | non-coding | upstream | 118929 | 29812947 ~ 29815841 (+) |
| G2316343 | NA | non-coding | upstream | 172393 | 29761730 ~ 29762377 (+) |
| G2316478 | NA | non-coding | downstream | 54751 | 30052060 ~ 30055050 (+) |
| G2316479 | NA | non-coding | downstream | 67581 | 30064890 ~ 30068961 (+) |
| G2316748 | NA | non-coding | downstream | 145518 | 30142827 ~ 30143131 (+) |
| G2316752 | NA | non-coding | downstream | 146292 | 30143601 ~ 30143938 (+) |
| G2316904 | NA | non-coding | downstream | 251986 | 30249295 ~ 30249553 (+) |
| G2314987 | NA | other | upstream | 1231346 | 28698740 ~ 28703424 (+) |
| G2314887 | NA | other | upstream | 1371175 | 28520255 ~ 28563595 (+) |
| kcng2 | LOC106570224 | other | upstream | 1887436 | 28016566 ~ 28047334 (+) |
| G2313197 | NA | other | upstream | 2441035 | 27493099 ~ 27493735 (+) |
| tmem79a | LOC106569868 | other | downstream | 820719 | 30817937 ~ 30822555 (+) |
| G2317455 | NA | other | downstream | 836421 | 30833730 ~ 30835101 (+) |
| G2317562 | LOC100196669 | other | downstream | 1100310 | 31097619 ~ 31127687 (+) |
| G2317685 | LOC106569887 | other | downstream | 1224808 | 31222117 ~ 31223562 (+) |
| LOC110488286 | chtop | other | downstream | 1337510 | 31334757 ~ 31340531 (+) |
