G2316854 (LOC106569863)


Basic Information

Item Value
gene id G2316854
gene name LOC106569863
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 30220487 ~ 30222132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2649907
CTTAAATACAGTTCCTGGGGGAATCACCAGGTGAGCAAGTTTGTGTTGCAGCCCAGCAGTGACACACCTGATTTAACTGAGTTAATTGTTAGTTATGGCTCAGAGTCAAGTCCAGGACCTCAGCGGGTGGTGTATGTGTGTCAAATCTTGCACGTTGTCCCATGGTAAACATTCCAGACATagaataaaatacatttgtggTAGCCTACCTGTTGAATTTCTCGTTCTGGGAGTGTGCTCCGTCGTCAGACGAGCCCATGGGCAGTAGCATGACGTTGCGGCCGATGGCTTCCTGGAAGGTCAGGGTGGCTGGGATGCTGCAGCCTTCCCGCGTCAGGTCAGGCTCCACACCGAACACGGTCTTCATGGCCTTTCTACCAGCCATGTAATGGGGATGGTTAAAGTCGGACACCCAGGGTTTGGCCCCGTGGCCCGTGTACACCTTGAGCTTGTTGGGACTCTCCAGTTCAGCAAACTTCTTCTCCAGGTGGCCAGTAACCTTGATGGGAgaggattatatatatttttaaacatgttttgaCCTTCATATTAAAGTCTCATTGAGATAAAATATTATATAAACAGTAATGAAAAGAAAATACACAGTcagattggggcggcaggtagcccagtggatagagtgttgggccagtaaccaaaagtttgactacctttaaacagcttggagaattccagaaaattatgtcatggctttagaagcttctgatcggctaattgaccatttgtgtcaattggaggtgtacctgtggatgtatttcaaggccaccttcaaactcagtgcctctttgcttgacatgggaaaatcaaaagaaatcagccaagacctcagaattgttgttgttgttgacctccacaagtctgggagcaatttccaaacgcctgaaggtaccacattcatctgtacaaacaatagtatgcaagtataaacactatgggatcatgcagccgtcatacagaTCAGGTAGGAGATGCGTTcggtcttctagagatgaacgtactttggtgcgaaaagtacaaatcaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacagttacaaaagtatctattccacagtaaaacaagtcctatatcgacataacctgaaaggccactaagcaaggaagaagccactgctccaaaaccgccataaaaaaagcacaGTTTGCAACTCCACATGGGTACCATTTGGAGAAAtggcctttggtctgatgaagaaaaaaaaaaagaactgtttggccataatgaccatgggccaaaatatcagcaatagtgtgtgaaaaccttgaagacttacagaaaacgtttgacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttattttccaccataatttgcaaataaattcataaaaaatcctacaatgtgattttctggatttttttccctcattttgtctgtcatagttgaagtgtacctatgatgaaaatta

Function

NR:

description
cytosolic non-specific dipeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2649907 True 1529 lncRNA 0.43 2 30220487 30222132

Neighbor

gene id symbol gene type direction distance location
LOC110488244 LOC106569856 coding downstream 530147 29686639 ~ 29690340 (-)
LOC110488241 akap9 coding downstream 576072 29520862 ~ 29644415 (-)
si:dkey-266f7.9 LOC106570214 coding downstream 736926 29477395 ~ 29483561 (-)
mrpl9 mrpl9 coding downstream 764966 29447718 ~ 29455521 (-)
LOC110488233 LOC106570204 coding downstream 789638 29415630 ~ 29430849 (-)
LOC110488254 LOC106569865 coding upstream 462078 30684210 ~ 30720463 (-)
LOC110514499 LOC106570155 coding upstream 530654 30752786 ~ 30753679 (-)
LOC110517423 LOC106570155 coding upstream 541681 30763813 ~ 30764670 (-)
LOC110488255 LOC106570155 coding upstream 578312 30800444 ~ 30801373 (-)
LOC110488258 LOC106570155 coding upstream 582814 30804946 ~ 30807748 (-)
G2316745 NA non-coding downstream 79153 30141131 ~ 30141334 (-)
G2316714 NA non-coding downstream 109664 30109286 ~ 30110823 (-)
G2316690 NA non-coding downstream 204361 30015272 ~ 30016126 (-)
G2316647 NA non-coding downstream 263762 29954189 ~ 29956725 (-)
G2316635 NA non-coding downstream 311604 29906755 ~ 29908883 (-)
G2316895 NA non-coding upstream 22944 30245076 ~ 30245315 (-)
G2316907 NA non-coding upstream 29620 30251752 ~ 30252000 (-)
G2317060 NA non-coding upstream 146968 30369100 ~ 30369312 (-)
G2317213 NA non-coding upstream 248522 30470654 ~ 30470882 (-)
G2317214 NA non-coding upstream 249766 30471898 ~ 30472111 (-)
G2316696 NA other downstream 180890 30034298 ~ 30039597 (-)
G2316235 NA other downstream 720242 29497930 ~ 29500245 (-)
LOC110488229 LOC106570201 other downstream 923986 29283078 ~ 29318812 (-)
G2313729 NA other downstream 3695878 26524244 ~ 26524609 (-)
G2312079 LOC106582599 other downstream 4251126 25968983 ~ 25969361 (-)
G2318269 NA other upstream 913375 31135507 ~ 31135959 (-)
LOC110488289 LOC106569889 other upstream 1101256 31323368 ~ 31334791 (-)
G2318387 LOC106569884 other upstream 1122923 31345055 ~ 31352890 (-)
si:ch211-191i18.4 LOC106569897 other upstream 1400385 31622507 ~ 31623952 (-)
LOC110488303 LOC106569912 other upstream 1691843 31913237 ~ 31955694 (-)

Expression


Co-expression Network