G2317052


Basic Information

Item Value
gene id G2317052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 30364545 ~ 30364852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2650113
ccaataatagtgagagacttgcttgggccaagaaacacgagcaatggacgtaAGACCAGTGGAAATatttcctttggtctgatgagtccaaatttgagattttttgttccaaccgccgtgtctttgtgagacacagagtaggtgaacggatgatgtcccaattgagatggtttgggatgagctggaACGCAGAATGAAAAAGCTGAAAGCTttgaaagctgtcatcaaggcagagtggctactttgaagaatctcaaatattaacacttttttggatactacatgattccatatgtgttatttcatag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2650113 True 308 lncRNA 0.41 1 30364545 30364852

Neighbor

gene id symbol gene type direction distance location
LOC110488252 LOC106569863 coding upstream 139903 30191475 ~ 30224642 (+)
LOC110488251 LOC106570151 coding upstream 180631 30178624 ~ 30183914 (+)
LOC110489425 LOC106569855 coding upstream 239235 29817983 ~ 30125310 (+)
LOC118946499 NA coding upstream 264155 30099701 ~ 30100390 (+)
LOC118946528 NA coding upstream 286781 30077150 ~ 30077764 (+)
LOC110488253 LOC106569864 coding downstream 144461 30509313 ~ 30544994 (+)
LOC110489445 NA coding downstream 371046 30735898 ~ 30738385 (+)
tmem79a LOC106569868 coding downstream 453085 30817937 ~ 30822555 (+)
LOC118946481 NA coding downstream 523958 30888810 ~ 30898886 (+)
LOC110488270 LOC106569874 coding downstream 732699 31097551 ~ 31103860 (+)
G2316909 NA non-coding upstream 111356 30252845 ~ 30253189 (+)
G2316904 NA non-coding upstream 114992 30249295 ~ 30249553 (+)
G2316752 NA non-coding upstream 220607 30143601 ~ 30143938 (+)
G2316748 NA non-coding upstream 221414 30142827 ~ 30143131 (+)
G2316479 NA non-coding upstream 295584 30064890 ~ 30068961 (+)
G2317205 NA non-coding downstream 100106 30464958 ~ 30465405 (+)
G2317217 NA non-coding downstream 108864 30473716 ~ 30473921 (+)
G2317221 NA non-coding downstream 110618 30475470 ~ 30475683 (+)
G2317316 NA non-coding downstream 236318 30601170 ~ 30618659 (+)
G2317419 NA non-coding downstream 389327 30754179 ~ 30754389 (+)
G2316421 NA other upstream 433594 29922384 ~ 29931480 (+)
G2314987 NA other upstream 1661121 28698740 ~ 28703424 (+)
G2314887 NA other upstream 1800950 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 2317211 28016566 ~ 28047334 (+)
G2313197 NA other upstream 2870810 27493099 ~ 27493735 (+)
G2317455 NA other downstream 468878 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 732767 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 857265 31222117 ~ 31223562 (+)
LOC110488286 chtop other downstream 969967 31334757 ~ 31340531 (+)

Expression


Co-expression Network