G2317471


Basic Information

Item Value
gene id G2317471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 30854858 ~ 30855088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2650574
GTGTGTATAGTCGAATGGCCTACCTCCTCGTGTTCATGTAGAAGACCCGTTAGCTGTTTTACACATATGTGGTTTACAGTTAGGACATTTGTATACGTACAGAATGTTGAGAGAATCTCAATTGTATACTCAAcatgtcctctctccttctcaaaacccattggatgagaaagccagaggtcccgcccctctgaccttctcctccaatgaaTTTTGAaaaggaggcaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2650574 True 231 lncRNA 0.44 1 30854858 30855088

Neighbor

gene id symbol gene type direction distance location
tmem79a LOC106569868 coding upstream 32303 30817937 ~ 30822555 (+)
LOC110489445 NA coding upstream 116473 30735898 ~ 30738385 (+)
LOC110488253 LOC106569864 coding upstream 309864 30509313 ~ 30544994 (+)
LOC110488252 LOC106569863 coding upstream 630216 30191475 ~ 30224642 (+)
LOC110488251 LOC106570151 coding upstream 670944 30178624 ~ 30183914 (+)
LOC118946481 NA coding downstream 33722 30888810 ~ 30898886 (+)
LOC110488270 LOC106569874 coding downstream 242463 31097551 ~ 31103860 (+)
LOC110488269 LOC100196669 coding downstream 265826 31120914 ~ 31127679 (+)
LOC110488267 NA coding downstream 288452 31143540 ~ 31146770 (+)
LOC110488268 thap7 coding downstream 290996 31146084 ~ 31155830 (+)
G2317454 msto1 non-coding upstream 37565 30816162 ~ 30817293 (+)
G2317394 NA non-coding upstream 60030 30789673 ~ 30794828 (+)
G2317441 NA non-coding upstream 67261 30787342 ~ 30787597 (+)
G2317436 NA non-coding upstream 74128 30780496 ~ 30780730 (+)
G2317420 NA non-coding upstream 99292 30755275 ~ 30755566 (+)
G2317478 NA non-coding downstream 5481 30860569 ~ 30860772 (+)
G2317509 NA non-coding downstream 81301 30936389 ~ 30948496 (+)
G2317533 NA non-coding downstream 114973 30970061 ~ 30970379 (+)
G2317557 LOC106569871 non-coding downstream 142857 30997945 ~ 31001064 (+)
G2317455 NA other upstream 19757 30833730 ~ 30835101 (+)
G2316421 NA other upstream 923907 29922384 ~ 29931480 (+)
G2314987 NA other upstream 2151434 28698740 ~ 28703424 (+)
G2314887 NA other upstream 2291263 28520255 ~ 28563595 (+)
G2317562 LOC100196669 other downstream 242531 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 367029 31222117 ~ 31223562 (+)
LOC110488286 chtop other downstream 479731 31334757 ~ 31340531 (+)
LOC118946484 jtb other downstream 762086 31617119 ~ 31621139 (+)
LOC110488305 LOC106569913 other downstream 1079795 31934883 ~ 31988737 (+)

Expression


Co-expression Network