G2317594


Basic Information

Item Value
gene id G2317594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 31066321 ~ 31077186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2650737
GAAATCCCAAATGAAGAATTTCTCAAGGGATAATCGTGAGGACGAAACGGTTAGGGTAATAGGGGGTAACTAGCCCACACTAAGAACAATTTCTAATTGCTGACACAAAAAAGCAATGTTTGGAGAAAAATTGGCTCGGCCTATGGGCAAGACATCTTCATCTCGTAAAGGTTGCTCAACGGACTCAAAGTGATGATGCCCTTCAAATTGAGTGAAACTAAAATGCCAGGCCCCCTGCTACTTCTTCTGTGCTGGAGCTATGTCTTGAAAGCTACACACGCATCAATTATAACCCAGACACCTGGAGTGGTGATGGTGAAAGCTGGTGATACAGTGACCTTGAAATGCCATTTGAGTGAGATTATCACCTACTGCTTCTCTGTGAGTTGGATAAAAGTGGACCCCAGGACTGGAACACACAGCATGAGTACACCCTTAACGGTTGATAACATTTCAACGGACCAGGAACAGGACAACCTATGTTCCGTCACAATCACCAATGCAAATagagagaaagggtaggGAACAGCACTAAAGCCCCAACCATCCAAATCGTCTCTTCGCCAGAGGTTGACCGCATCTTCATCCCTCTGCTGTGTTTGGTGTTGGAAGTGGTCCCGTCTCAGGTCCGTGTGTTCTGGCTCATAGACGGGAGAGAAGAGAGTGGACTCACTGACTCCACCTGGACAGACAACAGTGATTCAGCCACAGAGTTCACTAGGAACCAGATTATTGTCCAGGCACAGGAGTGGGACAGACGAGCAGAGTTTACATGTGTGGTGGAGTTTGAGGGGAAAAATATCACCAAAACACTGCTGCAGAAAAATGATTCCAATGCCATGTGCACAATGTTGATGTATGGGGCCTCTGCAGCTGCTCTCCTCACACTAATAGTTGCTGTCACTATCGCTGTGTGTCTGCACCGTGGGCATCCTGTGGTTATTGATGCAGATACAAGACAAAGAGGCACAGGCACTGAGAACAGATGGGATCAATCtgGGACACGTGGAGAAGCAAGAAGGCCAGTTAGATCATCGTTCTCGGAGGTCCAGTATGCGACTTTGGACCATATCAATTTTGGGAGACGCACAAATACCGTTCTCCAATCAGATTTTGACAAAGAAATTGCATAACAATTCCTTGTATTTTGTCATGATGTAGATGCTTATGAACTGCCACTGAAAACATTTCAGATGATTATTTATGTATAAAGCAAGAGCCGGTGTCCGCAATTGCAAAGTACTTTCTTTGATATTGGAATTCAACTGTGGAGTAGTCTCCCATTAGTCATTAAGCTGTCCCAGTCCAGAAAGACTTTCAGAGGTCAGGTTAGATCCCTTCCGTCGGAAAAAGTGCACAGGTCTAAATAGGAAAATTACTGAATATTCTTGAATTTTGTAtggattgtgtatttattatggtGTAGGCCAGTTAGGGACTTATCATAGGCCCATGTCACAGGAGGtaggtggcaccttaattggggaggatgggctcgtggtattggctggagtggaatagtatgaaatacatcaaacacatggattgATGCCAATCCATCTGCtttgttccagacattattatcagccgttctcccctcagcagcctccactggcccGTGTATTTCCATGGATGTTCTTGTGTTGTGTCCTGTTTTTGTCCTACACAGAAGACCACATTGGAAATAAGTGTTCTTACACTGTTGTGTGTCATCCTCTGGGATTCTTTGTACTTTTAAAACTGTAAGAAATGTAttatccaaaatcaaatcaatcaatcaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2650737 True 1782 lncRNA 0.44 9 31066321 31077186

Neighbor

gene id symbol gene type direction distance location
LOC118946481 NA coding upstream 168349 30888810 ~ 30898886 (+)
tmem79a LOC106569868 coding upstream 243766 30817937 ~ 30822555 (+)
LOC110489445 NA coding upstream 327936 30735898 ~ 30738385 (+)
LOC110488253 LOC106569864 coding upstream 521327 30509313 ~ 30544994 (+)
LOC110488252 LOC106569863 coding upstream 841679 30191475 ~ 30224642 (+)
LOC110488270 LOC106569874 coding downstream 20365 31097551 ~ 31103860 (+)
LOC110488269 LOC100196669 coding downstream 43728 31120914 ~ 31127679 (+)
LOC110488267 NA coding downstream 66354 31143540 ~ 31146770 (+)
LOC110488268 thap7 coding downstream 68898 31146084 ~ 31155830 (+)
LOC110488271 LOC106569876 coding downstream 80039 31157225 ~ 31173468 (+)
G2317557 LOC106569871 non-coding upstream 65257 30997945 ~ 31001064 (+)
G2317533 NA non-coding upstream 95942 30970061 ~ 30970379 (+)
G2317509 NA non-coding upstream 117825 30936389 ~ 30948496 (+)
G2317478 NA non-coding upstream 205549 30860569 ~ 30860772 (+)
G2317595 NA non-coding downstream 983 31078169 ~ 31078564 (+)
G2317610 NA non-coding downstream 14250 31091436 ~ 31091672 (+)
G2317614 NA non-coding downstream 17659 31094845 ~ 31095086 (+)
G2317638 NA non-coding downstream 71877 31149063 ~ 31149263 (+)
G2317639 NA non-coding downstream 72419 31149605 ~ 31149856 (+)
G2317455 NA other upstream 231220 30833730 ~ 30835101 (+)
G2316421 NA other upstream 1135370 29922384 ~ 29931480 (+)
G2314987 NA other upstream 2362897 28698740 ~ 28703424 (+)
G2314887 NA other upstream 2502726 28520255 ~ 28563595 (+)
G2317562 LOC100196669 other downstream 20433 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 144931 31222117 ~ 31223562 (+)
LOC110488286 chtop other downstream 257633 31334757 ~ 31340531 (+)
LOC118946484 jtb other downstream 539988 31617119 ~ 31621139 (+)
LOC110488305 LOC106569913 other downstream 857697 31934883 ~ 31988737 (+)

Expression


Co-expression Network