G2318597 (LOC100136012)


Basic Information

Item Value
gene id G2318597
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 31641898 ~ 31642169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2651848
tactaatggttttctttgagactgtggtcccagctctcttcaggtcattgaccaggtcctgccgtgttgttctgggctgatccctcaccttcctcatgatcattgatgccccacgaggtgagatcttgcatgaagCCCCAgaacgagggtgattgaccgtcatcttgaacttcttccattttctaataattgtgccaacagttgttgccttctcaccaagctgcttgcctaattgtcctgtagcccaatccagccttgtgcaggtctacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2651848 True 272 lncRNA 0.49 1 31641898 31642169

Neighbor

gene id symbol gene type direction distance location
LOC118946484 jtb coding upstream 20759 31617119 ~ 31621139 (+)
glmp glmp coding upstream 43650 31592958 ~ 31598248 (+)
LOC110488282 LOC106569895 coding upstream 49143 31579007 ~ 31592755 (+)
LOC110488283 LOC106569891 coding upstream 63136 31556480 ~ 31578762 (+)
LOC110488276 LOC106569890 coding upstream 99495 31522250 ~ 31542403 (+)
LOC110488287 LOC106569900 coding downstream 58481 31700650 ~ 31711516 (+)
LOC110488296 LOC106569903 coding downstream 172658 31814827 ~ 31826946 (+)
LOC110488297 LOC106569902 coding downstream 186019 31828188 ~ 31855884 (+)
LOC110488300 LOC106569907 coding downstream 225806 31867975 ~ 31888423 (+)
LOC110488301 LOC106569908 coding downstream 247898 31890067 ~ 31909751 (+)
G2318586 NA non-coding upstream 4917 31636726 ~ 31636981 (+)
G2318583 NA non-coding upstream 6776 31634904 ~ 31635122 (+)
G2318573 NA non-coding upstream 13892 31627775 ~ 31628006 (+)
G2317893 NA non-coding upstream 53737 31584260 ~ 31588161 (+)
G2317877 NA non-coding upstream 92985 31548698 ~ 31548913 (+)
G2318607 NA non-coding downstream 7684 31649853 ~ 31650084 (+)
G2318608 NA non-coding downstream 7979 31650148 ~ 31650605 (+)
G2318637 NA non-coding downstream 30439 31672608 ~ 31672850 (+)
G2318655 NA non-coding downstream 47146 31689315 ~ 31689524 (+)
G2318671 NA non-coding downstream 70392 31712561 ~ 31712937 (+)
LOC110488286 chtop other upstream 301367 31334757 ~ 31340531 (+)
G2317685 LOC106569887 other upstream 418336 31222117 ~ 31223562 (+)
G2317562 LOC100196669 other upstream 514211 31097619 ~ 31127687 (+)
G2317455 NA other upstream 806797 30833730 ~ 30835101 (+)
LOC110488305 LOC106569913 other downstream 292714 31934883 ~ 31988737 (+)
G2318792 NA other downstream 311453 31953622 ~ 31954513 (+)
G2319921 NA other downstream 1300034 32942203 ~ 32943392 (+)
LOC110487593 LOC106570137 other downstream 1527294 33166851 ~ 33175323 (+)
G2320160 NA other downstream 1808990 33451159 ~ 33451620 (+)

Expression


Co-expression Network