G2318851 (tp8l2)


Basic Information

Item Value
gene id G2318851
gene name tp8l2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 32039690 ~ 32041826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2652153
GCTTTTATTGTAGCTTTCAATAATATTAATACAGTTGCCTATGTGATAGTACTGATTGTATATTCATCAGAATTGAAAGAAGCATCTTGAATTATGGTAAATTACAAGTGCCAGTAAGTAATCCAACTCCAGGTGCAATATTCACTATAGCCCACTAGAGGACAGCATGGCTTCATGAACTGGTCTTTGTTCACAGTTTTGGCTAAGAACATGATAACCTGTTGCATTAATGGCATGTACTGAAACTGGAATGACACGTTAATCAATGTTTGCATATCTAGTCTCACAATGCAGGCAGGTGATGCATGCTTGCCTCATTTCCTGAGGCCATTTTCCGGGGAAAGCCTGAGGGTGCTGTCTTTTTGACTGTTCCTGTTTCCTTCTTTGCCAAACATTTTGTAGTCTGAAGTTTAACAAAACAGAACTCACAATAATCTTTCAAGCCTGATAGATACAAACTATATTTTGGCCCGTAAGTCCTGTAATTGCAGATATTCCCATTCGAAATCTAAGACAGTTCTAGAAAACAGATAACTTGCAAAGGGGTAGGGAACACCCGTTAGAGTTCACTTGCTGTGCAGTTCTGTATCTCCTGTGGAAAGTGTTATGGTTCATGGTTAATTGTTGCCTCATTCTTCTCCCATTGCATAACATCCACTAAGTGCTACTGCTGAAATACTACACACTGTAAAACATGTTATAAACAAACGTTTAAACTGCTAGCCCCCCAACCCCATCCTGTAGTCTTAACACACTCGTAAAATAGCTAATAAAAGAGCTAATGTCTTAAAACAGGAGGACtagtcaattgaaattagaccacAGATGCATTCTTATCGTGCTGGAAGCAGGGAGTCCTGACAAAGAAGTCAACAAAAAATATTTGGACGATTTCACAGGTgattttagcaaATGTTTGAATGGACTTTACTTAGCTCCAACAGCATTCGACTGAAATGCATTTAGGCAGAGGCAGAGGTAATATCCTGATGGTGAAATGTGACTACGCATATCAATCACATTCATATTGTGATAATGATGAATGCAcaatatatcgcccagccctaatgCAGATGGCTTATGTTGTAAAGCAAGGGCGACGATTCCATGCCCTCATAAAGATCCCAACATAATGTCCCCATTAAGCTACCAAAATGATATTTTCATGGGCAAACTGAATTCAGAATTCTTTAATAGGCCTGCCACAGTTTCTCCTTTTTCCAGCGTTGTTCGTAATTCCCACTCAAAGCTTGCCTTCCTCAACCAGTTTGTTCAGGCCATTGCAGATCTTGGTGAGATTAGGCCAGAGTGGGCCGCCGGGGGTGTAGAGGTTGGTCAGTAGGTCTGGGTCAGAGTAGTGGTTGAAGACATGCCGAATACGTCCAAAGGATTTGGGTGTCAGGTGTTTCTCCACGAGCTTCAGCAAGATGTCCCTACAATCTGTCAGAAGCTCCATCATGACAGCCTTATCAAATGTGAACTCCACCTGATTGTCGTCATGACCCCCTGGTGCAGCTTCTTCTTGAAGTCCTGAGCCAGGCTGAGCTCCTCTTTACTGAAGCGGTTGTGCCGAAAGAGAACCCCCACCTTTACCACCACCTTTACCAGGTCCTTGACCACCTTTTGGGCCTCTGTGCGGTTTCCAGAGTGTTCCTTGGAGATGCGGTAGAGCTCGTCCAGGATTTCGCTGCTGGTGTCGTCAATTAACATCTGCACCATGGATTTGCTGGCCATGTGGCTGAGGATTTTCTTCTGGGCCTTCATGGCCATGTCCTTAGAGCTGAA

Function

NR:

description
tumor necrosis factor alpha-induced protein 8-like protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2652153 True 1785 lncRNA 0.43 4 32039690 32041826

Neighbor

gene id symbol gene type direction distance location
LOC110488302 LOC106569910 coding upstream 71294 31955665 ~ 31968396 (+)
LOC110488305 LOC106569913 coding upstream 100977 31934883 ~ 31988737 (+)
LOC110488301 LOC106569908 coding upstream 129939 31890067 ~ 31909751 (+)
LOC110488300 LOC106569907 coding upstream 151267 31867975 ~ 31888423 (+)
LOC110488297 LOC106569902 coding upstream 183806 31828188 ~ 31855884 (+)
LOC110488308 LOC106569916 coding downstream 179097 32220923 ~ 32353844 (+)
LOC110489447 LOC106570022 coding downstream 324748 32366574 ~ 32369564 (+)
LOC118946529 LOC106569920 coding downstream 329980 32371806 ~ 32372537 (+)
LOC118946466 LOC106570022 coding downstream 330728 32372554 ~ 32376549 (+)
LOC110488310 LOC106570022 coding downstream 335229 32373725 ~ 32388367 (+)
G2318776 NA non-coding upstream 87191 31946646 ~ 31952499 (+)
G2318736 NA non-coding upstream 123484 31849285 ~ 31916206 (+)
G2318728 NA non-coding upstream 181282 31809163 ~ 31858408 (+)
G2318732 NA non-coding upstream 230714 31808885 ~ 31808976 (+)
G2319106 NA non-coding downstream 50303 32092129 ~ 32092383 (+)
G2319356 NA non-coding downstream 315598 32357424 ~ 32357916 (+)
G2319371 NA non-coding downstream 339854 32381680 ~ 32382325 (+)
G2318792 NA other upstream 85177 31953622 ~ 31954513 (+)
LOC118946484 jtb other upstream 418553 31617119 ~ 31621139 (+)
LOC110488286 chtop other upstream 699159 31334757 ~ 31340531 (+)
G2317685 LOC106569887 other upstream 816128 31222117 ~ 31223562 (+)
G2319921 NA other downstream 900377 32942203 ~ 32943392 (+)
LOC110487593 LOC106570137 other downstream 1127637 33166851 ~ 33175323 (+)
G2320160 NA other downstream 1409333 33451159 ~ 33451620 (+)
G2321378 LOC106569991 other downstream 2295284 34337110 ~ 34354024 (+)
G2321656 LOC105025880 other downstream 2807352 34849178 ~ 34850391 (+)

Expression


Co-expression Network