G2319739


Basic Information

Item Value
gene id G2319739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 32584063 ~ 32584294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2653147
tgaacatttcaacatcttggccatgttctgttataatctccactcggcacagccagaagaggactggccacgcctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggagttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2653147 True 232 lncRNA 0.48 1 32584063 32584294

Neighbor

gene id symbol gene type direction distance location
LOC110488315 NA coding upstream 124991 32453907 ~ 32459072 (+)
LOC118946461 NA coding upstream 185561 32395064 ~ 32398502 (+)
LOC110488310 LOC106570022 coding upstream 195696 32373725 ~ 32388367 (+)
LOC118946466 LOC106570022 coding upstream 207514 32372554 ~ 32376549 (+)
LOC118946529 LOC106569920 coding upstream 211526 32371806 ~ 32372537 (+)
LOC110488320 NA coding downstream 24991 32609285 ~ 32614559 (+)
LOC110488322 LOC106569928 coding downstream 76723 32660576 ~ 32683300 (+)
LOC110489432 col14a1 coding downstream 101393 32685687 ~ 32782036 (+)
LOC110488323 LOC106569930 coding downstream 206059 32790353 ~ 32820390 (+)
LOC110488335 LOC106569945 coding downstream 436327 33020621 ~ 33034414 (+)
G2319732 NA non-coding upstream 6640 32577222 ~ 32577423 (+)
G2319723 NA non-coding upstream 10511 32573302 ~ 32573552 (+)
G2319718 NA non-coding upstream 13144 32570662 ~ 32570919 (+)
G2319471 NA non-coding upstream 44244 32538166 ~ 32539819 (+)
G2319432 NA non-coding upstream 104511 32478784 ~ 32479552 (+)
G2319745 NA non-coding downstream 3819 32588113 ~ 32588314 (+)
G2319782 LOC100380685 non-coding downstream 50133 32634427 ~ 32648468 (+)
G2318792 NA other upstream 629550 31953622 ~ 31954513 (+)
LOC110488305 LOC106569913 other upstream 642149 31934883 ~ 31988737 (+)
LOC118946484 jtb other upstream 962926 31617119 ~ 31621139 (+)
LOC110488286 chtop other upstream 1243532 31334757 ~ 31340531 (+)
G2317685 LOC106569887 other upstream 1360501 31222117 ~ 31223562 (+)
G2319921 NA other downstream 357909 32942203 ~ 32943392 (+)
LOC110487593 LOC106570137 other downstream 585169 33166851 ~ 33175323 (+)
G2320160 NA other downstream 866865 33451159 ~ 33451620 (+)
G2321378 LOC106569991 other downstream 1752816 34337110 ~ 34354024 (+)
G2321656 LOC105025880 other downstream 2264884 34849178 ~ 34850391 (+)

Expression


Co-expression Network