G2320658 (LOC100136003)


Basic Information

Item Value
gene id G2320658
gene name LOC100136003
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 33048812 ~ 33049602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2654192
ttttctTGAATTTCACTGTTTTCACAGGGGAAAGCACCCTAAGCACTCTGATTTGTGATTTGGCTTTgggtgtacatttttttttattgcagaCGGTCTGGGAAACCATCCAAATAGGTTTAAACCTTGCTTACATGGCGGATCGTTGCTAGAGGAGATGTTGAATCAGGGGACTGAACAGCAGGACAAATAACATACGCAGAGAGGAGGACCTGTTATATGTTGATTTACGATAGGTTTTTGTTTGCCCTGGATCTCATGGAATTTTTGAGTTTCATCAACCTGATATGCTAAGGGAGAAAAAATGTAGTAGTTAGAAATCCCAAACATTACTTATATTATTAACCAAGTTCTTCATAAGTATACCCAGAGAGGGCGATCTGTTGCCACCATGGCTCAGGTATGTTACCTTCCACTGTAAGATGAACCGTGCTAACCAGCAGCCCGTGGGAATCCAACACGGTATATGTCCCACAGTCGTCTATCTTCAACCCTTTGAGGACCACAAACCCTTCGACCTCCTTAAGACGACCACTGTTGACCTCCTCTTCACCCCTCATCCACAGGACCGTCATCTCTGTGCTGTTCCTCCCCTGGAAGACCACTTTCTTGGCCTGGGGAGTGTGGAGCTTCAGGTCCAGGGTTTCACCCACCCTCAAGGACTCCTCGGACGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2654192 True 674 lncRNA 0.46 2 33048812 33049602

Neighbor

gene id symbol gene type direction distance location
LOC110488334 LOC106569944 coding downstream 28537 33007311 ~ 33020275 (-)
LOC110487591 LOC106569942 coding downstream 74424 32943096 ~ 32974388 (-)
trnaa-ugc-211 NA coding downstream 86075 32962659 ~ 32962737 (-)
LOC110488333 LOC106569942 coding downstream 88801 32957914 ~ 32960011 (-)
LOC110488329 LOC106569939 coding downstream 118612 32924086 ~ 32930200 (-)
LOC110488337 vps52 coding upstream 2795 33052397 ~ 33061264 (-)
LOC110488338 rng2a coding upstream 15238 33064840 ~ 33068255 (-)
LOC118946532 NA coding upstream 96911 33146513 ~ 33152363 (-)
hsd17b8 hsd17b8 coding upstream 235643 33285245 ~ 33289019 (-)
brd2a NA coding upstream 241321 33290923 ~ 33303536 (-)
G2320663 NA non-coding downstream 42678 33005061 ~ 33006134 (-)
G2320666 NA non-coding downstream 57239 32991259 ~ 32991573 (-)
G2320665 NA non-coding downstream 58193 32990391 ~ 32990619 (-)
G2320664 NA non-coding downstream 58643 32989834 ~ 32990169 (-)
G2320618 NA non-coding downstream 139685 32908901 ~ 32909127 (-)
G2320687 NA non-coding upstream 35484 33085086 ~ 33085367 (-)
G2320688 NA non-coding upstream 35820 33085422 ~ 33085646 (-)
G2320689 NA non-coding upstream 37423 33087025 ~ 33087573 (-)
G2320691 NA non-coding upstream 39145 33088747 ~ 33088991 (-)
G2320697 NA non-coding upstream 52377 33101979 ~ 33102189 (-)
G2320623 NA other downstream 98874 32917502 ~ 32949938 (-)
LOC110488319 LOC106569927 other downstream 461507 32584624 ~ 32587517 (-)
G2319641 NA other downstream 575014 32394868 ~ 32473798 (-)
G2319615 NA other downstream 690232 32358348 ~ 32358580 (-)
LOC110488303 LOC106569912 other downstream 1114571 31913237 ~ 31955694 (-)
G2320755 onmy-uea other upstream 313710 33363312 ~ 33395092 (-)
G2320761 NA other upstream 360897 33410499 ~ 33412502 (-)
LOC110488353 NA other upstream 366935 33413400 ~ 33425462 (-)
LOC110488358 LOC106569966 other upstream 441489 33489584 ~ 33494907 (-)
G2322234 NA other upstream 1311481 34361083 ~ 34361388 (-)

Expression


Co-expression Network