G2320755 (onmy-uea)


Basic Information

Item Value
gene id G2320755
gene name onmy-uea
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 33363312 ~ 33395092 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2654297
ATCTTACTTTTATTTAAAATGAACACCAAAAAGAAAGCAAAAAATACAGACGTTCTGCAGGCTATACAGCACCtaacaaaatcaagatcccacaaactaaggtggaaaacaggctgcctaagtatgatccccaatcagagacaacgataaacagctgcctctgattggaacCGTACTAGGCCAACATAGATTTGCCcaccaaatcacaccctgacctaaccaaatagagaataaaaaaggcTATctgaggtcagggcgtgacacctgtgatttattttcatgccagccagGAGTTCACGTCCTCCAGCGGATGTATGGCTGTGAGCTGGATGATGACGGCAGATTTCCTCAGTCTGGACAAGAGCACTCGTACCTGGACTGCTGCCAACCAGAAAGCTGCCATCAGCTAGCTTAAGTGGGATGCAACTGGAGATAACGCTAACTATTGGAAGAATTATCTAGAAAACACATGCATTGAGTGGCTTAAGAAGTATGTCAACTACGGCAAAGACACTTTGGAAAGGAAAGtCCCTCCCTCAGTGTCTCTGCTCCAGAAGAGCCCCTCCTCTCCAGTGACCTGCCACGCTACAGGTTTCTACCCCAGTGGAGTCATGGTGTTCTGGCAGAAAGACGGACAAGGTCACCAGGAAGGTGTGGAGAATGGAGAGACTCTCCCCAACAATGATGGAACCTTCCAGAAA
>TU2654299
GGAGAGAATAGTGAAAGAAAGTATACAGTTGTGTTGTTCAACCCAGCGTTACCATTCAATCTCATCTAAACCGATAAAGAAATGATTTCCTTCTGTCTCTTGTTTCTCTGGATTCCTTCAACGTCTGCAGATCACCACTCTTTGAAATACTTATACACTGCAGTCTCAGGTGATACTGACTTCCCAGAGTTCACGGTGGTGGGTTTGCTGGACGACCAACAGTTTGTGCACTTTGGCAGCAACACCAAGACACTGGTCAACGACGCTGAGTGGATGAATAAAACAGGAAAATACTACAATGATCTCTACAAAGAGCCCCTGATTAACCAATATGAAGGCTTCAAAAACCTCATTACGTTTGCAAAGAAGCAGTTTAACCAAACCCAGTCAAAAGgTGTTCACACAATCCAGAACTTGTACGGCTGTGAGTGGAATGATGAGACTGAACTCCAAGATTATTTCCATCACTATGGATACGATGGTGAGGATTTCATTTCATTAGACATGAAGACCGTAAGATGGATAACCTCCGTACAGCAGGCAGACACCATCAAACAGAAGTGGGACGACAACAGCAAGGATCTGCACTATCTCAAATGGTACTTCACTAAGGAGTGTATTGACACTTTGAAGAAGTATGTGGACTTCGCCAGCAGCGTCTTGAAGAAGATAGTCCCTCCCTCAGTGTCTCTGCTCCAGAAGACCCCCTCCTCTCCAGTGACCTGCCACGCTACAGGTTTCTACCCCAGTGGAGTCATGGTGTTCTGGCAGAAAGACGGACAAGGTCACCAGGAAGGTGTGGAGAATGGAGAGACTCTCCCCAACAATGATGGAACCTTCCAGAAA

Function

NR:

description
MHC class Ib antigen

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2654297 False 701 lncRNA 0.47 3 33363312 33365030
TU2654299 True 846 TUCP 0.45 5 33363312 33395092

Neighbor

gene id symbol gene type direction distance location
psmb12 lmp2/d coding downstream 10021 33350492 ~ 33353291 (-)
psmb9a psmb9-a coding downstream 13681 33345276 ~ 33349631 (-)
LOC110488345 tap2a1 coding downstream 19426 33337177 ~ 33343886 (-)
brd2a NA coding downstream 59776 33290923 ~ 33303536 (-)
hsd17b8 hsd17b8 coding downstream 74293 33285245 ~ 33289019 (-)
LOC110488352 onmy-uea coding upstream 27030 33392060 ~ 33395457 (-)
LOC110488353 NA coding upstream 49837 33413400 ~ 33425462 (-)
LOC110488354 NA coding upstream 71425 33436455 ~ 33447762 (-)
LOC110488357 LOC106569964 coding upstream 115758 33479769 ~ 33488466 (-)
LOC110488358 LOC106569966 coding upstream 124554 33489584 ~ 33494907 (-)
G2320767 psmb8b non-coding downstream 2473 33357493 ~ 33360839 (-)
G2320799 NA non-coding downstream 28194 33237786 ~ 33335118 (-)
G2320716 NA non-coding downstream 223651 33139459 ~ 33139661 (-)
G2320710 NA non-coding downstream 240566 33122525 ~ 33122746 (-)
G2320707 NA non-coding downstream 242781 33120220 ~ 33120531 (-)
G2320820 NA non-coding upstream 3771 33368801 ~ 33376035 (-)
G2320848 NA non-coding upstream 31640 33396670 ~ 33398232 (-)
G2320850 NA non-coding upstream 34572 33399602 ~ 33400614 (-)
G2320759 NA non-coding upstream 41085 33406115 ~ 33409639 (-)
G2320773 NA non-coding upstream 47797 33412827 ~ 33413222 (-)
G2320623 NA other downstream 413374 32917502 ~ 32949938 (-)
LOC110488319 LOC106569927 other downstream 776007 32584624 ~ 32587517 (-)
G2319641 NA other downstream 889514 32394868 ~ 32473798 (-)
G2319615 NA other downstream 1004732 32358348 ~ 32358580 (-)
LOC110488303 LOC106569912 other downstream 1429071 31913237 ~ 31955694 (-)
G2320761 NA other upstream 45469 33410499 ~ 33412502 (-)
G2322234 NA other upstream 996053 34361083 ~ 34361388 (-)
LOC110489328 LOC105025867 other upstream 1133996 34499026 ~ 34506457 (-)
LOC110488361 LOC106569969 coding upstream 122459 33517551 ~ 33529251 (-)

Expression


Co-expression Network