Gene
RNA
| Item | Value |
|---|---|
| gene id | G2321440 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 34453809 ~ 34467124 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| polyhomeotic-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2655088 | True | 215 | lncRNA | 0.61 | 2 | 34453809 | 34467124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489288 | f131b | coding | upstream | 58400 | 34374118 ~ 34395409 (+) |
| LOC110489266 | LOC106569989 | coding | upstream | 167563 | 34273307 ~ 34286246 (+) |
| LOC110487599 | LOC106569987 | coding | upstream | 221956 | 34206176 ~ 34231853 (+) |
| LOC110488377 | LOC105025850 | coding | upstream | 260153 | 34171145 ~ 34193656 (+) |
| LOC110488374 | LOC106569985 | coding | upstream | 308367 | 34135781 ~ 34145442 (+) |
| LOC110489308 | LOC106570000 | coding | downstream | 55130 | 34522254 ~ 34567625 (+) |
| LOC110489311 | LOC106570010 | coding | downstream | 421762 | 34888886 ~ 34894719 (+) |
| LOC110489298 | LOC106570012 | coding | downstream | 470971 | 34938095 ~ 34941903 (+) |
| LOC110489330 | LOC104962755 | coding | downstream | 493613 | 34960737 ~ 34966594 (+) |
| LOC110489302 | LOC106570022 | coding | downstream | 501945 | 34969069 ~ 34972560 (+) |
| G2321396 | NA | non-coding | upstream | 56668 | 34396475 ~ 34397141 (+) |
| G2321397 | NA | non-coding | upstream | 79810 | 34373739 ~ 34373999 (+) |
| G2321378 | LOC106569991 | non-coding | upstream | 99785 | 34337110 ~ 34354024 (+) |
| G2321347 | NA | non-coding | upstream | 108161 | 34290293 ~ 34345648 (+) |
| G2321520 | NA | non-coding | downstream | 116043 | 34583167 ~ 34583397 (+) |
| G2321552 | NA | non-coding | downstream | 173850 | 34640974 ~ 34641243 (+) |
| G2321559 | NA | non-coding | downstream | 179319 | 34646443 ~ 34649465 (+) |
| G2321562 | NA | non-coding | downstream | 186097 | 34653221 ~ 34653434 (+) |
| G2321563 | NA | non-coding | downstream | 187184 | 34654308 ~ 34654535 (+) |
| G2320160 | NA | other | upstream | 1002189 | 33451159 ~ 33451620 (+) |
| LOC110487593 | LOC106570137 | other | upstream | 1283692 | 33166851 ~ 33175323 (+) |
| G2319921 | NA | other | upstream | 1510417 | 32942203 ~ 32943392 (+) |
| G2318792 | NA | other | upstream | 2499296 | 31953622 ~ 31954513 (+) |
| G2321656 | LOC105025880 | other | downstream | 382054 | 34849178 ~ 34850391 (+) |
| LOC110487604 | LOC106570016 | other | downstream | 806015 | 35025996 ~ 35277684 (+) |
| LOC110489253 | LOC106597474 | other | downstream | 973910 | 35441034 ~ 35521453 (+) |
| G2321738 | LOC106597474 | other | downstream | 1024007 | 35491131 ~ 35498127 (+) |
