G2321615


Basic Information

Item Value
gene id G2321615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 34741587 ~ 34746477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2655275
TCAGTGAGTAAGGATGAATCTTTATTGGTGATTTCAGAAAAGCCAGACCACATCCCCCAGCATCCATATAGGCAGGATCAGTAGACATTACTGGTGCATTAGGGTAGTGGTGTGCTCATGGGATTTGTAGTTTATTTATAACAGTCACAACAGGTAGTAGTTTATAATCCACATTGGGAAGGGGAAATAGGCTGTGTACATTACCCGCAATGCCGTTTAGTAGCATACCATCATTGTGAGGATGGGCTACAAATGCCCACAAAAAGTTGTAGTAATCATACAGTATACAGACATGTAGAAAAATACAGCTGTTAAAAGTTTATAAGCTTCTGCAAACAAGTCCCAGGTATCAAAAAGTTGCTTCTTCGTCCATCAAAAGATGGGTGGTGTTAGAAGCCTGTGCTGGGAGATGTAGTTCAAATTCTTCCAGGTTTTGTTTTCTTCCTTCAAGTCCATAGTTTGTGGTTGTTTCcgcttttgttacattacaacacacacagacaagactaCAGCCCCCACAGTGCACCTGGATAGTCTCAGTGGATGGTGCCAATAGTGAACAGGCTCATGGAAAATAAAGTAGAGTAAAGATGGTCTTGAAAAATACAAGGGAGATAAAAATGAGAACTGCATTCCCACTTAAAAAGTCGTAGCAAGGAAAAGAAACAAGAGTAGTGATAATAACAACGACAACAACGACGATAATACTAGCAATAATAACTGTAATAGAGAGAAGAATAAAAAAGAACATTGAATTCTATGTCTGAAATCAACAAAGACCTTAAAATCCAGAACTGGTATAATTACAACCTCACTACCAAGGTGAGTTGGTAGTACGCAGTACAATTCCATCTAATTTTACCGAAATGTACTGCTAAAGTGGGCCAGCTCCAAAATGTATCCTGGTCAAACCGTAAAAAGAAAGAACAACTTCAGTAATCAAGATTTAGCgtaagagtttttttttttttttatcccccaGAACACCTGAGAAATTGACAATGATTCCAATCATTTTATACTACATTTATATATTCAAGCCATGTATATTATTACATCTATAGTCACATGTTCAAGCATatatcatatacacacacatatctaGTGAGAGATCAGTTTTCGTATTTAATTGTACATGTGTATGGTACATTAGGGTGTATTGTTTCACTGGGTAAAGTTGTTCAGGAAAGGTGTAGACACACTCTTCTGTGTGTCAATCTACATATATACGATTTCCTCTTACAGCACGATACGCAAAATAAAGAACAAACCAAGAAAATAAAAGGTATAGGTAGTTCAGTTACtatgttgaggtgtgtgtgtgttcagatggAGGATCAGGATGAGCACCATGTATAGTCCGcactaataagaagaagaatTGTAATCAAAGGTGAGGTGTGTTAACGGTCAGCATGCTCAGGTTCATGCTAAACCCTGCCAACTTAACCCGGGCCATCGATTCCAAACCAGTTTCAATTCGGTGTCACAATTCAAAATTggatcagaagagagagagagagagagagagagagagacgatgcTGTAGAAAGTGATGAAGTGTTGTGTGCTATCATACATGGCCCTGCGTTTCAAGGTCCAGCTTGCTGTCAGGGCCAAATAAGTGTGTGTGCGAGATaatttgagagtgtgtgtgagagtacgTGCATGAATGTAATTTAATGTAAAAATGCATTTGTAGTCACTGGTCCAGCTTATTTGACTGTGTGGCTTGACATGTCTGTTTGCGGTGTGCGTCTGTGCCGAACATATTCACCCATCGACATGAATACCTGGCAACACATTTGAGCAATATTTATTCACAAATATCTATGTGGCTGCAGCTGTCCTCGCGATTGATCACTGACTGTAGCATTTCcatttattctctctctcgctctctctcagtgcCAGACACACAATTAAAACGATTTAATTCCAGAAAGGAATCAAAGAGAAGAGAACAAATTAAAAGGGCAACTCCACCACTTTTCAAATTCACTTTCGCTATCTCCAACACAATACCAGTGTCAACATACATAACATGGCCAagggtatgtggacacctgctcgtcgaagatctcattccaaaatcatggccattaatatggagtcggtccctcctttgctgctataagagcctccactcttctgggaaggctgtccactagatgttggaacattgctgcagggacttgcttctattcagtcaccagagcattagtgaggtcaggcactgatgttggggcgattaggcctggctcacatggggttgaggtcagggctctgtgcaggccagtcaagttcttccacaccgatctagacaaaacatttctgtatggagcgctttgtgcatgggggcattgtcatgctgaaacaggaaagggccttccccaaactgttgccacaaagtcggaagcacagaattgtctagaatgtcattgtatgctatagcgttaaggttcccttcactggaagtaagggacctagcccgaaccatgaaaaacaaccccaaaccattattccttctccaccaccaaactttacagttggcactatgcattggggcagttagctttctcctggcatccaccaaacccagattcgtctgatATTGCTAATGGTGatgcatgattcatcactccagagaacgcgtttccattgctccagagtccaattgtggtgagctttacaccactccagccgacgcttggcattgcgcatggtgatcttaggtttgtgtgaggctgcttggccatggaaacccccatttcatgaagcttccgaagatcagttattgtgctgatattgcttccagaggcagtttggaactcggtagtgagtattgcaaccgaggacagcactcggtggtccagttctgtgagctagtgtggcctaccacttcgcggctgagccgttgttgctcctagatgtttccacttcacaataacagccgttgcagttgaccggggcagctctagcagggcagaaatttgtttaactgacttgttggaaaggtggcaacctatgacggtgccatgtttaaagtcactgagctcttcagtacgggccgttttactgccaatgtttcctatggagattgcatggctgtgtgcaagATTTTATAAAccagtcagcaacgggtgtggctgaaatatttGGCTGTGTAGTGTATGTGAAAAAGGTGCATTTCTAGGTTTTGTAGAAAAATCTAGTTAAAAAGTTCTCCCCAATGACATCAAAAGTTTCAACATTTTAAAAACTGTGATTTTCAAAAACTGAGATTCGCGGTCACGCGGGGAGCTAGAAAATACTCTCCCTTGGGCTAAAAACTTGTTGCAGGTGATGTCATAAGAGAAGCATTTTTTGGGGGACCTTACTTCGTATCTTTTTAAGCACAGACAATAGGAACGTGATGTTCTCACATATGTAAACACTGGTTTGATGGTGGAGATGACGATAATGCGGTTGAAAAGAGGAAGAATTGCCCTTTAAAAAGTAAACTTGTCATTTTTTCCATTTTCATCATCTCCAgaaccaccccaacatcaacatatgtgaaaagtgtttttttactacaaaacataaaTGCCCCATTTCCACATGTTAATGGTACTGGCGATGATGAACATGAAGAGAACATTTTTGAGAATTCCCTTTTAAGTGCTTCAACGAACCTAACAGAACAAAATTAAAACTATACAATGTCTTCGATCTGTCTATGTCCACAAACATTTACTAAGATAATTCTCCTCTCTTGCCGTCATGTTATCCCTGGATACAACCATTATACATTCTCTATGACGACCTCTGACCCCTCTATCTTAACGAGTTCAAAATATATCATTTACCAATCCATTTACCAATAGCCCCCATCTCTATACTAAACTCACccatatataaaatatacaaaatattaCTTCCAAAAACCCCTCTGAACTGTCCATCTTTGcaaatataaaaatatacagtTATGTTGAAATCTCTTTGCTTTCTTCTGTCCTGAACCACCTCTCCTAATCTTCCTCTTCTAGTTATACTGTAGCTCATGCTCTATTTTCTAGTTTGCCCACGTCTCCCTCCTTGCCCAGTACAGTtcaaaaatatacatgttttgtcatagaAATAAAGTACACACCTGTCTTCCCCTGGCTTGTCTCCTTGTCTATAGCTTAAAAACATTAGTTGTCTTGTGATCTGTATGATTTGAACACCTCATTTGAGCGGGTGCACGTATGGCCCTGCGCATTACCCGGAAAAACACTGCAATGCACCTGATACAAAACACTGAATGACGTCGCGGCGCCCAAGTGACAATACCCGTCAAAGAGACACGGGGAGTGAAACCAGCATAGCACAGAATCACTAAATGGAGGCTGCACTCACGGCAACACTGCAGGCTACTCGCAACATGGACGCTTACGCAAGGTGTCATACGATGCTTACGCCAAGTCTACATAGGCCGTACGCGCACCCCCTCAAATAAAGGGCTGCCAATGTTGCCttatacccctctctcctcctcctccaccgccttcctcctcttcctcctcctcctcacaagtcTCCGTGTCGACTCTCAAACTTGTTGAGGATGTTGCGGCACCGGCCCAGCTCCTTGCGCATGTCGGCCACTTCCTGTCTGAGAGCAGCGTTCTCTCGCTCCAGGAAGGCGGCGCGCACCGTGATCTGGTTCTCCTTGAGGCGCCGGGCGTCACGTGAGCGCTTGGCCGCCTCGTTGTTCTTGTAGCGCCGGCTCCAGTACTTGTCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2655275 True 4771 lncRNA 0.43 3 34741587 34746477

Neighbor

gene id symbol gene type direction distance location
LOC110489308 LOC106570000 coding upstream 173962 34522254 ~ 34567625 (+)
LOC110489290 LOC106569995 coding upstream 279091 34444152 ~ 34462496 (+)
LOC110489288 f131b coding upstream 346178 34374118 ~ 34395409 (+)
LOC110489266 LOC106569989 coding upstream 455341 34273307 ~ 34286246 (+)
LOC110487599 LOC106569987 coding upstream 509734 34206176 ~ 34231853 (+)
LOC110489311 LOC106570010 coding downstream 142409 34888886 ~ 34894719 (+)
LOC110489298 LOC106570012 coding downstream 191618 34938095 ~ 34941903 (+)
LOC110489330 LOC104962755 coding downstream 214260 34960737 ~ 34966594 (+)
LOC110489302 LOC106570022 coding downstream 222592 34969069 ~ 34972560 (+)
LOC110489317 LOC106570014 coding downstream 235253 34981730 ~ 34988181 (+)
G2321609 NA non-coding upstream 11273 34730017 ~ 34730314 (+)
G2321568 LOC106570003 non-coding upstream 74583 34665737 ~ 34667004 (+)
G2321567 LOC106570003 non-coding upstream 75944 34662353 ~ 34665643 (+)
G2321563 NA non-coding upstream 87052 34654308 ~ 34654535 (+)
G2321562 NA non-coding upstream 88153 34653221 ~ 34653434 (+)
G2321625 NA non-coding downstream 26241 34772718 ~ 34779908 (+)
G2321632 NA non-coding downstream 42894 34789371 ~ 34792949 (+)
G2321638 NA non-coding downstream 62228 34808705 ~ 34808992 (+)
G2321650 NA non-coding downstream 82786 34829263 ~ 34829547 (+)
G2321378 LOC106569991 other upstream 402390 34337110 ~ 34354024 (+)
G2320160 NA other upstream 1289967 33451159 ~ 33451620 (+)
LOC110487593 LOC106570137 other upstream 1571470 33166851 ~ 33175323 (+)
G2319921 NA other upstream 1798195 32942203 ~ 32943392 (+)
G2318792 NA other upstream 2787074 31953622 ~ 31954513 (+)
G2321656 LOC105025880 other downstream 102701 34849178 ~ 34850391 (+)
LOC110487604 LOC106570016 other downstream 526662 35025996 ~ 35277684 (+)
LOC110489253 LOC106597474 other downstream 694557 35441034 ~ 35521453 (+)
G2321738 LOC106597474 other downstream 744654 35491131 ~ 35498127 (+)

Expression


Co-expression Network