G2321960


Basic Information

Item Value
gene id G2321960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35314531 ~ 35315500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2655698
AAACTACcagttattttatttaaaaatgtaaaattcaGTGCAAAGTAATGTAGTGCATTAGTGTCTAGATCCCTGTTAGGTGGCAAAGTGTCACAAGAATCCTGTggggagagaaaacaagagaatACATTAATTTAATTTGTGTTAACTAATCAAGGTTCAACAAAGCACTTCAAGTCCTCAaatcctgagagagagaaagagagatggacagagagagagatatggatggagagcgagagagagagagagatggacggacagagagagagagagatggacagacagagagagagtggcctTTCAGATCTCTGCAGTAGGACTACATGCTGGCCATGAGGTTCTCCAGGTGGTACTCCAGGAGGCTGGAGAGCTCAGtgaccagagattctgggttaaaGTACCAGGCCAGCTGCTGCCCAAACATGTCATCAAGCAGAGCCATCAGCCCGCCCTGAAgagaacaccacacaacacataGATAATGGCTCTGAGTTACTAGCTTACCAagaggaaagagacaaggagagttACTCCCTGTAAAATGTCATTGAAACCCTGTTATTCAGGTCAACTAGGAATAAGGAAGTAAACTCTTGACTCTTACATTGAGCAGCAGCAGGTATCTCTCAGCCTTTGGCTCAATGCTGGCAGCAGCGGGCAGGAAGGAGTACAGGAGAGCGTACAGACGCTCCATGAACCCACCAGGGTGCTAaaggaaacagaggaggagagaagagaaattgAAGTGAATTTGCTAATAGAGAGACATCGAAACATGTACCAGTGAGATGCTACTTACCACAATCAGGGACTTCTGAGCTATCATCAACCCAAACAGCACCAGTTCAAAGAGGACATCTATCAGGTTAACATGATGGATCTAGGACAAGAAAATAGGAATGATTTCAAACAGATCAGATACTGTGATGTATAAAAGACAT

Function

NR:

description
uncharacterized protein LOC110516824

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2655698 True 944 lncRNA 0.44 2 35314531 35315500

Neighbor

gene id symbol gene type direction distance location
LOC110489282 LOC106588459 coding upstream 19333 35281588 ~ 35302970 (+)
LOC110487604 LOC106570016 coding upstream 36847 35025996 ~ 35277684 (+)
ndus5 ndus5 coding upstream 290404 35018461 ~ 35024127 (+)
LOC110489267 LOC106570013 coding upstream 300853 34988473 ~ 35013678 (+)
LOC110489317 LOC106570014 coding upstream 326350 34981730 ~ 34988181 (+)
LOC110489254 LOC106595653 coding downstream 143052 35458552 ~ 35488169 (+)
LOC118936453 LOC106595653 coding downstream 172409 35487909 ~ 35492518 (+)
LOC110489253 LOC106597474 coding downstream 176805 35441034 ~ 35521453 (+)
LOC110489268 LOC106570027 coding downstream 243060 35558560 ~ 35568391 (+)
LOC110489299 LOC106570032 coding downstream 322712 35638212 ~ 35643788 (+)
G2321955 NA non-coding upstream 17147 35289931 ~ 35297384 (+)
G2321931 NA non-coding upstream 100004 35213914 ~ 35214527 (+)
G2321899 NA non-coding upstream 140351 35127996 ~ 35174180 (+)
G2321758 NA non-coding downstream 5590 35321090 ~ 35330819 (+)
G2321963 NA non-coding downstream 8463 35323963 ~ 35339727 (+)
G2321762 NA non-coding downstream 22339 35337839 ~ 35346121 (+)
G2321793 NA non-coding downstream 44155 35359655 ~ 35360153 (+)
G2321733 LOC106570021 non-coding downstream 110207 35425707 ~ 35436132 (+)
LOC110489302 LOC106570022 other upstream 343905 34969069 ~ 34972560 (+)
G2321656 LOC105025880 other upstream 464140 34849178 ~ 34850391 (+)
G2321378 LOC106569991 other upstream 975334 34337110 ~ 34354024 (+)
G2320160 NA other upstream 1862911 33451159 ~ 33451620 (+)
G2321738 LOC106597474 other downstream 175631 35491131 ~ 35498127 (+)
G2321721 LOC106588478 other downstream 271087 35586587 ~ 35594913 (+)
LOC110511601 LOC106570043 other downstream 977278 36285727 ~ 36298893 (+)
G2323520 NA other downstream 1012904 36328404 ~ 36408978 (+)

Expression


Co-expression Network