G2321963


Basic Information

Item Value
gene id G2321963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35323963 ~ 35339727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2655702
GTGATGAAATGATCAAGTAAATGAAAAGACAGAGACAAATGCTTTTAAACTACcagttattttatttaaaaatgtaaaattcaGTGCAAAGTAATGTAGTGCATTAGTGTCTAGATCCCTGTTAGGTGGCAAAGTGTCACAAGAATCCTGTggggagagaaaacaagagaatACATTAATTTAATTTGTGTTAACTAATCAAGGTTCAACAAAGCACTTCAAGTCCTCAaatcctgagagagagaaagagagatggacagagagagagatatggatggagagcgagagagagagagagatggacggacagagagagagagagatggacagacagagagagagtggcctTTCAGATCTCTGCAGTAGGACTACATGCTGGCCATGAGGTTCTCCAGGTGGTACTCCAGGAGGCTGGAGAGCTCAGtgaccagagattctgggttaaaGTACCAGGCCAGCTGCTGCCCAAACATGTCATCAAGCAGAGCCATCAGCCCGCCCTGAAgagaacaccacacaacacataGATAATGGCTCTGAGTTACT
>TU2655704
GTGATGAAATGATCAAGTAAATGAAAAGACAGAGACAAATGCTTTTAAACTACcagttattttatttaaaaatgtaaaattcaGTGCAAAGTAATGTAGTGCATTAGTGTCTAGATCCCTGTTAGGTGGCAAAGTGTCACAAGAATCCTGTggggagagaaaacaagagaatACATTAATTTAATTTGTGTTAACTAATCAAGGTTCAACAAAGCACTTCAAGTCCTCAaatcctgagagagagaaagagagatggacagagagagagatatggatggagagcgagagagagagagagatggacggacagagagagagagagatggacagacagagagagagtggcctTTCAGATCTCTGCAGTAGGACTACATGCTGGCCATGAGGTTCTCCAGGTGGTACTCCAGGAGGCTGGAGAGCTCAGtgaccagagattctgggttaaaGTACCAGGCCAGCTGCTGCCCAAACATGTCATCAAGCAGAGCCATCAGCCCGCCCTGAAgagaacaccacacaacacataGATAATGGCTCTGAGTTACT
>TU2655703
GGCAAAGTGTCACAAGAATCCTGTggggagagaaaacaagagaatACATTAATTTAATTTGTGTTAACTAATCAAGGTTCAACAAAGCACTTCAAGTCCTCAaatcctgagagagagaaagagagatggacagagagagagatatggagagagagagagagatggacagacagagagagagtgagatggacagacagagagagagtggcctTTCAGATCTCTGCAGTAGGACTACATGCTGGCCATGAGGTTCTCCAGGTGGTACTCCAGGAGGCTGGAGAGCTCAGtgaccagagattctgggttaaaGTACCAGGCCAGCTGCTGCCCAAACATGTCATCAAGCAGAGCCATCAGCCCGCCCTGAAgagaacaccacacaacacataGATAATGGCTCTGAGTTACT
>TU2655701
CcagttattttatttaaaaatgtaaaattcaGTGCAAAGTAATGTAGTGCATTAGTGTCCAGATCCCTGTTAGGTGGCAAAGTGTCACAAGAATCCTGTggggagagaaaacaagagaatACATTAATTTAATTTGTGTTAACTAATCAAGGTTCAACAAAGCACTTCAAGTCCTCAaatcctgagagagagaaagagagatggacagagagagagatatggatggagagcgagagagagagagagatggacggacagagagagagagagatggacagacagagagagagtggcctTTCAGATCTCTGCAGTAGGACTACATGCTGGCCATGAGGTTCTCCAGGTGGTACTCCAGGAGGCTGGAGAGCTCAGtgaccagagattctgggttaaaGTACCAGGCCAGCTGCTGCCCAAACATGTCATCAAGCAGAGCCATCAGCCCGCCCTGAAgagaacaccacacaacacataGATAATGGCTCTGAGTTACT

Function

NR:

description
uncharacterized protein LOC110516824

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2655702 False 546 lncRNA 0.44 3 35323963 35339727
TU2655704 False 546 lncRNA 0.44 2 35323963 35332107
TU2655703 False 409 lncRNA 0.47 3 35324090 35332107
TU2655701 True 494 lncRNA 0.45 2 35331614 35339727

Neighbor

gene id symbol gene type direction distance location
LOC110489282 LOC106588459 coding upstream 28765 35281588 ~ 35302970 (+)
LOC110487604 LOC106570016 coding upstream 46279 35025996 ~ 35277684 (+)
ndus5 ndus5 coding upstream 299836 35018461 ~ 35024127 (+)
LOC110489267 LOC106570013 coding upstream 310285 34988473 ~ 35013678 (+)
LOC110489317 LOC106570014 coding upstream 335782 34981730 ~ 34988181 (+)
LOC110489254 LOC106595653 coding downstream 118825 35458552 ~ 35488169 (+)
LOC118936453 LOC106595653 coding downstream 148182 35487909 ~ 35492518 (+)
LOC110489253 LOC106597474 coding downstream 152578 35441034 ~ 35521453 (+)
LOC110489268 LOC106570027 coding downstream 218833 35558560 ~ 35568391 (+)
LOC110489299 LOC106570032 coding downstream 298485 35638212 ~ 35643788 (+)
G2321764 NA non-coding upstream 1393 35312039 ~ 35322570 (+)
G2321960 NA non-coding upstream 8463 35314531 ~ 35315500 (+)
G2321955 NA non-coding upstream 26579 35289931 ~ 35297384 (+)
G2321931 NA non-coding upstream 109436 35213914 ~ 35214527 (+)
G2321793 NA non-coding downstream 19928 35359655 ~ 35360153 (+)
G2321733 LOC106570021 non-coding downstream 85980 35425707 ~ 35436132 (+)
G2321777 NA non-coding downstream 195339 35535066 ~ 35535838 (+)
G2321998 NA non-coding downstream 196694 35536421 ~ 35536976 (+)
G2321999 NA non-coding downstream 197418 35537145 ~ 35538895 (+)
LOC110489302 LOC106570022 other upstream 353337 34969069 ~ 34972560 (+)
G2321656 LOC105025880 other upstream 473572 34849178 ~ 34850391 (+)
G2321378 LOC106569991 other upstream 984766 34337110 ~ 34354024 (+)
G2320160 NA other upstream 1872343 33451159 ~ 33451620 (+)
G2321738 LOC106597474 other downstream 151404 35491131 ~ 35498127 (+)
G2321721 LOC106588478 other downstream 246860 35586587 ~ 35594913 (+)
LOC110511601 LOC106570043 other downstream 953051 36285727 ~ 36298893 (+)
G2323520 NA other downstream 988677 36328404 ~ 36408978 (+)

Expression


Co-expression Network