G2322023 (LOC106570029)


Basic Information

Item Value
gene id G2322023
gene name LOC106570029
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35583814 ~ 35584186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2655766
CAGTCACTCAGGGTTAATGTTaatccatatttttttaaacacacctTAAGTGGAAATGTGGATAATTTGCTGTTGGGTTCATGTGTTTTAAATGAGCTGCCAGCCAGAGACATATCCCGTCTCATGGTGTGAGTTACCTTGACCATCTCGTAGTATGAACCACTGCTGAGCACAGAGGCTGACTGGAAGTAGGGCTGCTCGTCACTGTTCTTGAGGAAGACCAGCAGGCTTTCCCGGAGATGGTTGACCAGGTCCACGGCCCACTGCCGGTCACTCTGGCGGAGCTTAAGGTCCTGGGCCCGAAGCCTGATCCAACGGGCCAGCTCTGGGGAGATAGGGGCCAGCTCGTCCCCTGGTTTGGGGATCTTGGCTG

Function

NR:

description
cyclic GMP-AMP synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2655766 True 373 lncRNA 0.53 1 35583814 35584186

Neighbor

gene id symbol gene type direction distance location
LOC110489268 LOC106570027 coding upstream 15423 35558560 ~ 35568391 (+)
LOC110489253 LOC106597474 coding upstream 62361 35441034 ~ 35521453 (+)
LOC118936453 LOC106595653 coding upstream 91296 35487909 ~ 35492518 (+)
LOC110489254 LOC106595653 coding upstream 95645 35458552 ~ 35488169 (+)
LOC110489282 LOC106588459 coding upstream 288616 35281588 ~ 35302970 (+)
LOC110489299 LOC106570032 coding downstream 54026 35638212 ~ 35643788 (+)
ncdn ncdn coding downstream 109083 35693269 ~ 35702960 (+)
LOC110489281 LOC106570035 coding downstream 119728 35703914 ~ 35715579 (+)
ago4 LOC106511154 coding downstream 193062 35777248 ~ 35814633 (+)
LOC118946548 NA coding downstream 223508 35807694 ~ 35807777 (+)
G2322022 NA non-coding upstream 5910 35575451 ~ 35577904 (+)
G2322020 NA non-coding upstream 10537 35573054 ~ 35573277 (+)
G2322019 NA non-coding upstream 11072 35572484 ~ 35572742 (+)
G2321748 LOC106570028 non-coding upstream 11676 35569794 ~ 35572138 (+)
G2321999 NA non-coding upstream 44919 35537145 ~ 35538895 (+)
G2321779 NA non-coding downstream 292 35584478 ~ 35584776 (+)
G2322025 NA non-coding downstream 13652 35597838 ~ 35598075 (+)
G2322032 NA non-coding downstream 21777 35605963 ~ 35606251 (+)
G2321763 NA non-coding downstream 36283 35620469 ~ 35626505 (+)
G2322074 NA non-coding downstream 102237 35686423 ~ 35686653 (+)
G2321738 LOC106597474 other upstream 85687 35491131 ~ 35498127 (+)
LOC110487604 LOC106570016 other upstream 306151 35025996 ~ 35277684 (+)
LOC110489302 LOC106570022 other upstream 613188 34969069 ~ 34972560 (+)
G2321656 LOC105025880 other upstream 733423 34849178 ~ 34850391 (+)
G2321721 LOC106588478 other downstream 2401 35586587 ~ 35594913 (+)
LOC110511601 LOC106570043 other downstream 708592 36285727 ~ 36298893 (+)
G2323520 NA other downstream 744218 36328404 ~ 36408978 (+)
G2323704 NA other downstream 1063627 36647813 ~ 36648422 (+)
LOC110488401 LOC106570049 other downstream 1354896 36939068 ~ 37071496 (+)

Expression


Co-expression Network