G2321763


Basic Information

Item Value
gene id G2321763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35620469 ~ 35626505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2655461
ctgtgcttccctttatagtctgtaatggtttgcaaaccCCTGTGACACccctgttttgctagcacagactggcaaagcatcaatacagggctacACCGGTGTAGTACGAGTCGATTTTAGTGCTACGCTttgactgtttgatggttcgtcggagggcatagcaggatttcttataagcttccgggttagagtcccgcaccttgaaagcggcggctctagcctttagctcagtgcggatgttgcctgtaatccatggcttctggttgggttatgtacatacggtcactgtggggacgatgtcatcgatgcacttattgatgagcccaatgactgatgtggtgtactcctcaataccattggaggaatcctggaacatattccagtctgtgctcgcaaaacagtcctgtagctcagcatctgcttcatctgagcacttttttttgttgacagagtcactggtgcttcctgctttcatttttgcgtgtaagcaggaatcaggaggatagaattatgttcagatttgccaaatggagggcgagggagagctttgtaagcgtctctgtgtttggagtaaaggtggtccagagtttttttcccctctggttgcacatttaacatgctgatagaaatttggtaaaatgtatttaagttttcctgcattaaagtccccggctactaggagctcCGTCGTTTTCTTGTTTgattatggcggaatacagctcattcaatgctgtcttagtgccagcctctgactgtggtggtatgtaaacagctatgaaaaatacagatgaaaactctaggcaggtagtgtggtctactgtttatcatgagatactctacctcaggcgagcaatagctcgagacatccttagatattgtgcaccagctgttatttacaaaaatacataatccgccgccccttgtcttaccagacaacTTGAAAACTTGAAAACATCCGGGTTGGACATTAAATGGAATCAGGTTATGAGCTTaaacttcaaaataaaagtccaagTTTGACGCAATATAAATGTGAATAAAAATGTAATCATGCATTTAGAATAAAGTTGCCATAAATATAATTCTTCAAAAGTACAAAAATGACAACACAAAAATTGACTATGCGAACATTTTGGTACATTATTTAAAGTTAAACCAGTAGACAACTTAACAAATCAATGTGAATATTCATAACAGAAATAAATCAGTGAAATCAAAATGGTGTGCTATTTCTATTTCGCAGATTTTTTTCTGTTATGAATATTCACATTGATTTATTTTTACATAACACTTACAGAGAATATAACAATGTTATTGCATGAATGTACATTTCCCAACAAAACATTCTTACATTAATGTACATTTCCCAAATTCACAATTTGGGTGTCCACATTTTTTTTGTGCAGTAATGTTCTTGAGGGCACAGTGCATGTCATAGTGGGGGTAAAATAAGTTACATTTGATGGTTTGTTCATTTCAATTGTTCAAGTTCTGGAAGTCAATCTGTCTATCATTCAATTCAAGATATTCAAGGAACAAATGGTTTGGGGCAGTAATTGTTACATAGCCAACAGACTAGAACATTTCTAATTATAGGCTATGAAACCTGGGAAGAGcacaggtattttatcaaatgTGGTAGATATAAGTATAAGAGCACTTAAAAGTGATCAATGAAAAATGAATCTAGTTTATTAAGAGTTGCCTGTGTATTtcctcttaaggatcggacccttttttttcttcaattgtATGCcttaaatgacatacccaaatctaacttcctgtagctcaggacctgaagcaaggatatgcatacgCTTGataccatttcaaaggaaacactttgaagtttgtggaaaagtgaaattaatgtaggagaatataacacattagatctggtataAGATaatataaacaaaaaaacatgcattttcaatttttttgttttgttccatatactttgaaatgcaagagaaagaccataatataatattgcagtttaggcacagtttagattttggccactagacgGCAGCAGtgtttgtgcaaagtttcagattgatccagtgaagcattgcaatactggacaatattttgtatcaggtctgcccaaatgtgccgaattggtcaattgatacattttaaagtacataactatagagaacatacaacaatgatatggtaatacaaaatttaagtttacacactcccaggaatgtcataaatgatggatcattagcttatacactaaccttcacacatctagatggccggacggggtgggtgtggagccagagaaagcaggggttcaaactgtagaacccagttaccacattttgaatataaaaatggatttgatcAAACGAAACAGTGCTACATTTTAtgtctgggaccctcaggatgacaaatcagagcaagattactgaatggaagtacattatttaccttcagaggtgaatgtatcaaaccagtggCCATGATAaaggttttttgttgttgtgcactctcctcaaacaatagcatggtcttttttcactgtaatagctactgtaaattggacagtgcagctaGATTAACAAGACTTTAAGCTTTCTGCTTTCTGGAAAGTTTGCTCTTACTTAAAACGTCATGCTATTCACATTAGCGTACGTTAGCATAACCGTCCCAGTATAGGGACACTGATCCCGTAGAGGATTTATACCACTTCCGGTTAGTACCATCATTAATCCTCCCCCACTTAAGATACTGCTAGACTAgctgggcccaagcttgctgtacaacattaaatcCCATTCAGTCTGTCAACAAACaggcccaatagccatcatcactgttacattctcagaaagcatgagctccagAGTTGGGATAATCTTGtacaatacaccgacgcatgtatTGTATTCAAAACTCTAAATGGCCACTTAGTACTCTCgtcaaacagaaaacccaaaccctCTGCcacagatccacaaggtctgccatgagaggtgactatATAGTTCCCTTAAGGTAATGCACATTTAGTCaatctgctttctctgtgagagcttcccatgtctggagcacactgccatcagacacacacaattGAAACCACTTATCACTCCTTTACAAAAAACATGAAGGACATGGCTAAAGGCCAATCAAACTTGTGAAAACAACCCCCAGCTGTGTATTAACACTTTCCATGTTATCTGTTGTCTGTTTCTTGTGAGGTATGGAAACACTTAGttgattttatggattttgttGTGTTGCTTTTTGTGctgttgctctgtctgcatgctgcTTGTTCGATGTTGCTCTGCATGTGCTCACTGCTAATTGATTGTCTGTATTGTTATTGGAATTGTTTTTCATAACATGCCCAGGGACTGCAATAAAAAAATGTGTCGGCTGGCTAAAACTGACACTTtaactgaaacgttgattaatgtgcactgtccctgtaaagaTAAAAATTAAGTCAAACTCAAATTggagttggaagtttacatacacttaggttgtagtcattaaaacttgtttttcaaccactccacaaatttcttcttaactatagtattggcaagtcggttaggacatatactttgtgcatgacacaagtaatgtttccaacaattgtttacagacagattgtttcacttataattcactgtatcacaattccagcgggtcagaagtttacatacactaaattatatcatggctttagacaCTTATGATAGGCGAAttcacataatttgagtcaattggaggtgtacctgtggatgtatttcaaggcctaccttcaaacgcagtgcctctgattgacatcatgggaaaattaaaagaaatcagccaagacctcagaaaacaattgtagacctccaccagtctagttcatccttgggagcaatttccaaacgcctgaaggtaccacgttcatctgtacaaacaatagtacgcaagtataaaccccatgggaccacgcagccgtcataccgctcagacaggagacacgttctgtctcttagagatgcacgtactttggtgcgaaaagtgcaaatcaatcccagaacaacatcaaaatACCTTgcgaagatgttggaggaaacaggtacaaaagtatctacagccacagtaaaacaagtcctatatcgacataacataaaggccgctcagcaaggaagaagccactgctccaaaaccaccatatagaaagccagactgcggtttgcaactgcacatggggacaaagatggtacttgttgtcatgttgtggggatgcttgttgtggggatgctttgctgcaggagggactggtgcacttcacaaaatagatggcatcatgaggtaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaagctgggtcgcaaatgggtcttccaaatagacaatgaccccaagcatacttcgaaagatgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaaccctatggagaatttgtgggcagaactgaaaaaggaggcctacaaacctgactcagtttcactggatttgtcaggaggaatgggtcaaaattcacccaacttattgtgagaagcttgtggatcgttggaatgaggtgaagaagaggaccaaaaaagtgttcgtCATATTTTTAATGGAacaactgaacactacacaaaatgaaaacgaaacagtcccatgtggcactaacacggaaaataaacacccactactcaaaagtgaaaccaggctccctaagtatgattctcaatcagggacaacgattgacagctgcctctgattgagaaccatacaaggCGAACACAGCAAttccaaatcatagaaaaacgaacatagacaacccacccaactcacgccctaacCATACTACAACAAAGAcaataaaagaactaaggtcagaacgtgacagtggaaggctacttgaaacatttgaaccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtcaactttgAAAAAAAtttaatctgaaataaatcattctctctactattattctgacatttcacattcttaaaataaagtggtgatcataactgacccaagacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaatgtgtatgtaaacttccgacttcaactgtaaatacaaaACATGGTCAGAAACAGATAGTTGTAAACAATACTAAAGAAAGGCATTTGGAAAATAAAGAGGCCATTTAAAAAAGTATCTTATCCTCTCATGAATACCGCATTTGATAAAGGGTCCCATTCCCAACACAGTGTACTAAGAGAATGCACTGGCCCATCCTTTTTAAAACCACCTGATGGTGAGTGAACCTGAGGTCAGTGTATATCttacagggatcatcaactagattcagcgtagggacattttattttattgagcggatagtcagggggccggaacatcaTTTTAAATCATTGGtcgactgcaaattgaccgcaagaagcccaaacagactTAAACATAATAATTTCCAACGTAGCTTACATTAGTATATGATCACTTGCCTCTCTATTATGTGCagaaatacttgggaacagaatTCCCAAATTTAAATGACgcggagctgatttcctggtgtttttatgtccaacaatgaaaatgtaaaaaatgaagaATAATATTGTTTTATAATTTTTTTCCTCAGAAAACATGGGGGGCAAAATAAAACCACCGTGGGCCatcagttggggaaccctgcttgAGGTCTTGTCTGTCATGTAGGGATGAAcctgtctctctttgtttctgcctgctcctgatccacctctaccaGGGCCCATTTCTGGACCTCCCCGGACCCAAACAAGGTGAAGATGAAAGCTCCTACGGCGCTGATCCCGGccgacagacagaacacactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2655461 True 5998 lncRNA 0.39 2 35620469 35626505

Neighbor

gene id symbol gene type direction distance location
LOC110489268 LOC106570027 coding upstream 52078 35558560 ~ 35568391 (+)
LOC110489253 LOC106597474 coding upstream 99016 35441034 ~ 35521453 (+)
LOC118936453 LOC106595653 coding upstream 127951 35487909 ~ 35492518 (+)
LOC110489254 LOC106595653 coding upstream 132300 35458552 ~ 35488169 (+)
LOC110489282 LOC106588459 coding upstream 325271 35281588 ~ 35302970 (+)
LOC110489299 LOC106570032 coding downstream 11707 35638212 ~ 35643788 (+)
ncdn ncdn coding downstream 66764 35693269 ~ 35702960 (+)
LOC110489281 LOC106570035 coding downstream 77409 35703914 ~ 35715579 (+)
ago4 LOC106511154 coding downstream 150743 35777248 ~ 35814633 (+)
LOC118946548 NA coding downstream 181189 35807694 ~ 35807777 (+)
G2322032 NA non-coding upstream 14218 35605963 ~ 35606251 (+)
G2322025 NA non-coding upstream 22394 35597838 ~ 35598075 (+)
G2321779 NA non-coding upstream 35693 35584478 ~ 35584776 (+)
G2322023 LOC106570029 non-coding upstream 36283 35583814 ~ 35584186 (+)
G2322022 NA non-coding upstream 42565 35575451 ~ 35577904 (+)
G2322074 NA non-coding downstream 59918 35686423 ~ 35686653 (+)
G2322076 NA non-coding downstream 60861 35687366 ~ 35687567 (+)
G2322078 NA non-coding downstream 62960 35689465 ~ 35689671 (+)
G2322045 psmb2 non-coding downstream 90292 35716797 ~ 35727390 (+)
G2322954 NA non-coding downstream 126382 35752887 ~ 35754722 (+)
G2321721 LOC106588478 other upstream 25556 35586587 ~ 35594913 (+)
G2321738 LOC106597474 other upstream 122342 35491131 ~ 35498127 (+)
LOC110487604 LOC106570016 other upstream 342806 35025996 ~ 35277684 (+)
LOC110489302 LOC106570022 other upstream 649843 34969069 ~ 34972560 (+)
LOC110511601 LOC106570043 other downstream 666273 36285727 ~ 36298893 (+)
G2323520 NA other downstream 701899 36328404 ~ 36408978 (+)
G2323704 NA other downstream 1021308 36647813 ~ 36648422 (+)
LOC110488401 LOC106570049 other downstream 1312577 36939068 ~ 37071496 (+)
G2324003 NA other downstream 1425560 37052065 ~ 37062067 (+)

Expression


Co-expression Network