G2323024 (LOC106570040)


Basic Information

Item Value
gene id G2323024
gene name LOC106570040
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35868963 ~ 35869184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2656920
CCAAGCGTCTGCAGCTCCAGGGGAGCGCTGTAGCCTCCGTAGTcgatgggagagggggaggaggaagaggaggaggaagaggcggagaggagggaggaggagggggccgGGGTGGAGAAGGGGCGGATGAGGAAGACGTAGGTGGTGCCGGCCTTGAGGTTGTTGACGCTGATGCGGGTGGCGGCCGTCTTGACCGTTGAGTAGCTCTTGTCCTTCTGTTCC

Function

NR:

description
ephrin type-A receptor 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2656920 True 222 lncRNA 0.64 1 35868963 35869184

Neighbor

gene id symbol gene type direction distance location
LOC110489309 LOC106570039 coding upstream 32193 35822735 ~ 35836770 (+)
LOC110489318 LOC106570172 coding upstream 50267 35815808 ~ 35818696 (+)
ago4 LOC106511154 coding upstream 54330 35777248 ~ 35814633 (+)
LOC118946548 NA coding upstream 61186 35807694 ~ 35807777 (+)
LOC110489281 LOC106570035 coding upstream 153384 35703914 ~ 35715579 (+)
LOC110488378 NA coding downstream 218924 36088108 ~ 36092710 (+)
LOC110511601 LOC106570043 coding downstream 416543 36285727 ~ 36298893 (+)
LOC110488383 LOC106570042 coding downstream 447887 36317071 ~ 36397386 (+)
LOC110489313 tpmt coding downstream 708590 36577774 ~ 36580929 (+)
LOC110487616 LOC106570045 coding downstream 714255 36583439 ~ 36584376 (+)
G2323021 NA non-coding upstream 9986 35858759 ~ 35858977 (+)
G2323020 NA non-coding upstream 11321 35857216 ~ 35857642 (+)
G2323018 NA non-coding upstream 15382 35853366 ~ 35853581 (+)
G2322988 NA non-coding upstream 63385 35802733 ~ 35805578 (+)
G2323025 NA non-coding downstream 589 35869773 ~ 35870075 (+)
G2323026 NA non-coding downstream 1323 35870507 ~ 35870709 (+)
G2323028 NA non-coding downstream 2820 35872004 ~ 35872390 (+)
G2323030 NA non-coding downstream 5479 35874663 ~ 35874940 (+)
G2323033 NA non-coding downstream 19108 35888292 ~ 35888561 (+)
G2321721 LOC106588478 other upstream 274050 35586587 ~ 35594913 (+)
LOC110489253 LOC106597474 other upstream 358338 35441034 ~ 35521453 (+)
G2321738 LOC106597474 other upstream 370836 35491131 ~ 35498127 (+)
LOC110487604 LOC106570016 other upstream 591300 35025996 ~ 35277684 (+)
LOC110489302 LOC106570022 other upstream 898337 34969069 ~ 34972560 (+)
G2323520 NA other downstream 459220 36328404 ~ 36408978 (+)
G2323704 NA other downstream 778629 36647813 ~ 36648422 (+)
LOC110488401 LOC106570049 other downstream 1069898 36939068 ~ 37071496 (+)
G2324003 NA other downstream 1182881 37052065 ~ 37062067 (+)

Expression


Co-expression Network