G2323497


Basic Information

Item Value
gene id G2323497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 36299818 ~ 36300039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2657407
acctacatgtgcatattacctcaattacctcgactaaccggtgcccccgcacattgactctgtactggtaccgccctgtatatagcctcgctattgttattttactgctgctctttaattacttgttacttttattgaAAACaattttggggggtatttttcttaaaactgcattgttggttaaaggcttgtaagtaagcatttcactgtaaggtctacaag

Function

NR:

description
ceramide synthase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2657407 True 222 lncRNA 0.39 1 36299818 36300039

Neighbor

gene id symbol gene type direction distance location
LOC110511601 LOC106570043 coding upstream 925 36285727 ~ 36298893 (+)
LOC110488378 NA coding upstream 207758 36088108 ~ 36092710 (+)
LOC110489309 LOC106570039 coding upstream 463048 35822735 ~ 35836770 (+)
LOC110489318 LOC106570172 coding upstream 481122 35815808 ~ 35818696 (+)
ago4 LOC106511154 coding upstream 485185 35777248 ~ 35814633 (+)
LOC110488383 LOC106570042 coding downstream 17032 36317071 ~ 36397386 (+)
LOC110489313 tpmt coding downstream 277735 36577774 ~ 36580929 (+)
LOC110487616 LOC106570045 coding downstream 283400 36583439 ~ 36584376 (+)
LOC110489338 NA coding downstream 285330 36585369 ~ 36591508 (+)
LOC110487617 LOC106570046 coding downstream 301948 36601987 ~ 36636845 (+)
G2323493 NA non-coding upstream 9044 36290523 ~ 36290774 (+)
G2323492 NA non-coding upstream 9382 36290147 ~ 36290436 (+)
G2323486 NA non-coding upstream 21502 36278109 ~ 36278316 (+)
G2323477 NA non-coding upstream 30604 36266267 ~ 36269214 (+)
G2323400 NA non-coding upstream 127831 36170355 ~ 36171987 (+)
G2323563 NA non-coding downstream 103524 36403563 ~ 36407151 (+)
G2323565 NA non-coding downstream 110742 36410781 ~ 36411071 (+)
G2323572 NA non-coding downstream 118487 36418526 ~ 36422242 (+)
G2323637 NA non-coding downstream 237872 36537911 ~ 36574216 (+)
G2321721 LOC106588478 other upstream 704905 35586587 ~ 35594913 (+)
LOC110489253 LOC106597474 other upstream 789193 35441034 ~ 35521453 (+)
G2321738 LOC106597474 other upstream 801691 35491131 ~ 35498127 (+)
LOC110487604 LOC106570016 other upstream 1022155 35025996 ~ 35277684 (+)
G2323520 NA other downstream 28365 36328404 ~ 36408978 (+)
G2323704 NA other downstream 347774 36647813 ~ 36648422 (+)
LOC110488401 LOC106570049 other downstream 639043 36939068 ~ 37071496 (+)
G2324003 NA other downstream 752026 37052065 ~ 37062067 (+)
G2324095 NA other downstream 921840 37221879 ~ 37223573 (+)

Expression


Co-expression Network