G2325413


Basic Information

Item Value
gene id G2325413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 37519682 ~ 37522563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2659521
GCAAAAataattaaatattaaagcattagacctcactaaaggcttcagtcataccaaagttatacttaaatccaaactggttctctagcagattagtaagaatgtctcaacccgtgttcaagaatggccttttcccctttattcagattacaacctctcactttctgttacttgaaaaagagattatctcctaaatattttttaaacaagccatagaaagttggttgcaatttcagtttaatccaccagaaaagacagaacaaatattatggttaaacttaaatataataattgattaTtataaatgatatcataaataggaccggtggagttgtcacacaggcagctaacaaaaatatatggaaatgtctgctctactcaaaattacaaccaactaattgcagcattattgcaaaaatggaagaggcaagtgaaagatggccctgcattaaagatcaaaattggttaaagaaaattgtgatgaaaaaaaaaaagtataccagtttaatttaagTAGCAAAAACTTGACATCTGTGCCATATAgactgcaaaatagttgggaaaagatttgatgtacccattccatggtttatgaactgatacataTGTttccacatactgtatgtagttcAATGGCTgcttttacacaggcagcccagttcTGATCTATTACCACTAATTGGAAAAATATCAGTACAATATCCAAACGTACATACAGAATATCATATTTGTACTCAGACACACATCACACCTCCCTTAATCGCTATTTATATTGGAATTAAATGTATTGATCAGAAAAACACATCTGAAATGTTAAAACCACAAATCTTAGCTTAAAACGTGAATTGAAAGCATTCTATTGAACTTACACACTTTCAGGAAAGGAAGGATAATAAACTTCGTAAGATATGTAGTCTTACAATAAGAGAAGAATATatgcaaaataaaatacaaaatcaaGTGGACTTAAAGACCATAACATGTGGCAGTTAAACTTCTTGACACAATGAGTTGCCATGCATCCAGATTTTTCAATACGAGTTTCTCATCAAAATCATTTTCAGTGAACTACCAACCAAATCCTTGTGTGCATTTAACCAGGTGCAGCCTCTTACCACTAAACAAGGAATCTATTGCATACCAGTATGTCGGCTTCACAGCTAGGTTCAGCAAGGTGAGCTGAGAGAAACAACTACAACTGCTGTGGACAGAAGTGTGCTAGCTAGATGAGACTGATCAAATATGCTATAGAAACCGCAGGTAAATTGTCACATTGTTTCACATACAAGGGGAGTGCCAGGCACTGAGTTGAGGCATTTGTGACACAatcacattaaaaaaaaaaatgtttaactaggcaagtcagttaagaacaaattcttgttttcaatgacggcctaggaacagtgggttaactgcctgttcagggacagaacgacagatttgtaccatgtcagctcggggtttgaacttgcaaccttccggttactagtccaacgctctaaccactaggctacgctgccgcaaAAGATTTAATAAACGTTCAACTGATAGCACAACAAGGGGGATTTCAATAACATCCCTGGctcaagaaaaaaataataataatggattCAAAATGTGCATGTCCTATTCTGACACAAGTCAATCATTTACAGGTCCAATTCCCTCAAACTATTGTCTCACCATACGGTCTTCTCTCATGCCAAAAGTTGGCAAGATCCATTCTGAAAGTGAAACCATTCTGTTATGGGCTGTGATGCATGGGAGCTAGATTTACTAGGCGTTAAAATGTCCTCCTCTAAAGCTATATTTCTACTCTTTGTTCAATTTTTTTTGCCCTATGGAAATAGCACAGTTGCAAACACTTAGTAAGTCTGTCCAAATATTTGTATGGCTTGGAGACGCATACCCCACCCAAACCTTTTTCCTTCCCCACATCACAAAATAAAAGATGTGGGTGAGGGATTTCTTCCTCTCTCAGCTATGGGAGGCCCAGAGTACACCAACATACCACCAATCATTACAGACATCATAGCTTCATTAAAGGACGGGGTACCTGTGATTGGGCCATTCTAATAAATGTACATTAGGCACCAAATTGAGGAAAACAGACTAAAACAGGGAGGagctacctgaacttgtccaataagaaaagcACATTTCCATTTTCCGTTGCCAAAGAGTTTTGCTACGTTTTGCCCTAATTAATAAAATCATGATGCATTAAAAGCCACCTAAAGATAAAATGGCACAAACCTGTCATTCTTGGTGCCATACAACAGCAGTAGTTTGTATTTCTCCATGTCTCCCTTCACCTATCAAAATAAAGTTGTGTTGCAAAGTCCAATGagtcccccttcctccccctaaCCACAGATGAAATACCCTAACCACAGATGAAATTCACCAATCCCCATCCTAACCATAACTATTATTAAGCTGATAAAAATATTTGGGATtatataaacattttaaaaaagcatctcagagtaggagtgctgatctaggatcaggtcccccgtCTATGTCATCTAATTCATTATTCCAAGAGGCTTTGAGAATACGGACCCTGACCATGGATTAGTGGTTAGAAGCAGACTCTACCAAGTACCCACCCTCCCAGCCTTATTCTACTACAGTCCACCGTAGAGGtggatcttggcaaaggagatgGTCTCATAGTAGTCCTTGTGGCCTTTCTCGTAGATGACGAAGATAAACTTCCTGTCCTTTGCGCCGCCGCTCGTAAGTGATGTCATACAGGAGTAGCCGCTTGGCCCCGCCCAGATCTGGACGGCCTTCTTCTCCCACGACGTGCCATTGGTCAGAGACCAGCGCAGG

Function

NR:

description
sialidase-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2659521 True 2844 lncRNA 0.39 2 37519682 37522563
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110488415 LOC106570059 coding downstream 29466 37477223 ~ 37490216 (-)
LOC110487610 nelfe coding downstream 94587 37421586 ~ 37425095 (-)
LOC110488515 LOC106570055 coding downstream 122714 37390984 ~ 37396968 (-)
utp23 ch053 coding downstream 195438 37322046 ~ 37324244 (-)
LOC110489334 NA coding downstream 214998 37299686 ~ 37304684 (-)
LOC118946531 LOC106588215 coding upstream 188397 37710960 ~ 37722123 (-)
LOC110512153 LOC106588212 coding upstream 211799 37734362 ~ 37740660 (-)
rs5 LOC106570065 coding upstream 227075 37749638 ~ 37752475 (-)
LOC118946551 NA coding upstream 227659 37750222 ~ 37750352 (-)
LOC118946549 NA coding upstream 228214 37750777 ~ 37750904 (-)
G2325410 NA non-coding downstream 13266 37505669 ~ 37506416 (-)
G2325409 LOC106570060 non-coding downstream 17828 37500484 ~ 37501854 (-)
G2325394 NA non-coding downstream 43268 37472454 ~ 37476414 (-)
G2325371 LOC106570056 non-coding downstream 75244 37442132 ~ 37444438 (-)
G2325350 NA non-coding downstream 117777 37401706 ~ 37401905 (-)
G2325428 NA non-coding upstream 17054 37539617 ~ 37540070 (-)
G2325421 NA non-coding upstream 66227 37588790 ~ 37590335 (-)
G2325468 NA non-coding upstream 80197 37602760 ~ 37604021 (-)
G2325472 NA non-coding upstream 85293 37607856 ~ 37608059 (-)
G2325480 NA non-coding upstream 101245 37623808 ~ 37624211 (-)
si:ch211-153f2.3 LOC104957086 other downstream 245123 37268611 ~ 37274589 (-)
LOC110488406 med30 other downstream 282757 37204063 ~ 37240288 (-)
G2323152 NA other downstream 1705081 35811050 ~ 35814601 (-)
G2322592 NA other downstream 1950266 35568749 ~ 35569416 (-)
G2322545 LOC106595184 other downstream 1998228 35477914 ~ 35521454 (-)
LOC110517080 tmem42 other upstream 358376 37880939 ~ 37884444 (-)
G2327199 NA other upstream 1531734 39054297 ~ 39057009 (-)
mrps21 mrps21 other upstream 1627309 39149872 ~ 39234977 (-)
G2327347 LOC106570093 other upstream 1786335 39308560 ~ 39309991 (-)
G2327348 LOC106588182 other upstream 1787879 39310442 ~ 39316952 (-)

Expression

G2325413 Expression in all Baseline Samples

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G2325413 Expression in each Bioproject

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G2325413 Expression in each Sample
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Co-expression Network