Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118946770 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493658.1 |
| NCBI id | JAAXML020000857.1 |
| chromosome length | 2864942 |
| location | 2238654 ~ 2239683 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005041624.1 | False | 252 | mRNA | 0.60 | 3 | 2238962 | 2239607 |
| TU2666817 | True | 321 | lncRNA | 0.60 | 3 | 2238654 | 2239683 |
2,234,800
2,235,200
2,235,600
2,236,000
2,236,400
2,236,800
2,237,200
2,237,600
2,238,000
2,238,400
2,238,800
2,239,200
2,239,600
2,240,000
2,240,400
2,240,800
NW_023493658.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497191 | LOC106597766 | coding | downstream | 62346 | 2154735 ~ 2176616 (-) |
| LOC118946763 | LOC106591540 | coding | downstream | 226481 | 2009540 ~ 2012481 (-) |
| LOC110511350 | LOC106601386 | coding | downstream | 285396 | 1934506 ~ 1953566 (-) |
| LOC118946762 | LOC106591691 | coding | downstream | 342254 | 1875707 ~ 1896708 (-) |
| LOC110518942 | LOC106591068 | coding | downstream | 812626 | 1418841 ~ 1426336 (-) |
| G2331615 | NA | non-coding | downstream | 13153 | 2224723 ~ 2225809 (-) |
| G2331616 | NA | non-coding | downstream | 15423 | 2222607 ~ 2223539 (-) |
| G2331613 | NA | non-coding | downstream | 19812 | 2218501 ~ 2219150 (-) |
| G2331612 | NA | non-coding | downstream | 22086 | 2215266 ~ 2216876 (-) |
| G2331606 | NA | non-coding | downstream | 57603 | 2180949 ~ 2181359 (-) |
| G2331631 | NA | non-coding | upstream | 28375 | 2267982 ~ 2270318 (-) |
| G2331650 | NA | non-coding | upstream | 82661 | 2322268 ~ 2322663 (-) |
| G2331654 | NA | non-coding | upstream | 88925 | 2328532 ~ 2329285 (-) |
| G2331657 | NA | non-coding | upstream | 98208 | 2337815 ~ 2338185 (-) |
| G2331665 | NA | non-coding | upstream | 114213 | 2353820 ~ 2356620 (-) |
| G2331554 | LOC106601385 | other | downstream | 199894 | 2037887 ~ 2039068 (-) |
| G2331536 | LOC106601386 | other | downstream | 245647 | 1951097 ~ 1993315 (-) |
| G2331305 | NA | other | downstream | 813883 | 1225408 ~ 1425079 (-) |
| LOC110513705 | exosc9 | other | downstream | 1036976 | 1192764 ~ 1202030 (-) |
| G2331771 | NA | other | upstream | 302435 | 2542042 ~ 2544584 (-) |
| G2331942 | LOC106602138 | other | upstream | 567365 | 2755110 ~ 2809111 (-) |
