G2330658


Basic Information

Item Value
gene id G2330658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493658.1
NCBI id JAAXML020000857.1
chromosome length 2864942
location 339646 ~ 342583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2665443
ggtataaataatatgacctctcagacactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcactgactcgtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcagacactgactggtatacataatatgacctctcagacactgactggtatacataatatgacctctcagacactgactggtataaataatatgacctctctctgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcactgactggtataaataatgacctctcagacactgactggtataaataatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagtcACTGACTGGTAtgaataatatgacctctcactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatgacctctcagacactgactggtataaataatatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106600615

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2665443 True 1213 lncRNA 0.36 2 339646 342583

Neighbor

gene id symbol gene type direction distance location
LOC110510695 NA coding upstream 4333 346916 ~ 351655 (-)
LOC118946767 LOC106594220 coding upstream 10237 352777 ~ 374364 (-)
LOC110519448 LOC106602123 coding upstream 55526 398109 ~ 406244 (-)
LOC118946761 NA coding upstream 157843 500426 ~ 504599 (-)
LOC110519451 NA coding upstream 391220 733803 ~ 805684 (-)
G2330641 LOC106597766 non-coding downstream 49154 290166 ~ 290492 (-)
G2330639 NA non-coding downstream 51489 287273 ~ 288157 (-)
G2330637 NA non-coding downstream 53668 285366 ~ 285978 (-)
G2330624 NA non-coding downstream 92049 247364 ~ 247597 (-)
G2330390 NA non-coding downstream 118100 221196 ~ 221546 (-)
G2330670 LOC106601385 non-coding upstream 110794 453377 ~ 454004 (-)
G2330669 NA non-coding upstream 142950 485533 ~ 553096 (-)
G2330683 NA non-coding upstream 219821 562404 ~ 609712 (-)
G2330693 NA non-coding upstream 271959 614542 ~ 676133 (-)
G2330314 NA other downstream 298536 39516 ~ 41110 (-)
G2330702 NA other upstream 291328 633911 ~ 634879 (-)
G2330705 LOC106597013 other upstream 321628 664211 ~ 684830 (-)
LOC118946760 LOC106610545 other upstream 465355 806485 ~ 949488 (-)
LOC110513705 exosc9 other upstream 857564 1192764 ~ 1202030 (-)
G2331305 NA other upstream 882825 1225408 ~ 1425079 (-)

Expression

G2330658 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G2330658 Expression in each Bioproject

Bar chart with 12 bars.
G2330658 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network