Item | Value |
---|---|
gene id | G2331305 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NW_023493658.1 |
NCBI id | JAAXML020000857.1 |
chromosome length | 2864942 |
location | 1225408 ~ 1425079 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
short coiled-coil protein B |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU2666383 | False | 2724 | TUCP | 0.43 | 6 | 1225408 | 1425079 |
TU2666386 | False | 3084 | TUCP | 0.42 | 6 | 1225408 | 1425079 |
TU2666387 | False | 3197 | lncRNA | 0.42 | 5 | 1225408 | 1425079 |
TU2666389 | False | 2865 | TUCP | 0.43 | 6 | 1225408 | 1425079 |
TU2666379 | False | 1233 | TUCP | 0.46 | 4 | 1226616 | 1235544 |
TU2666384 | False | 1095 | TUCP | 0.47 | 5 | 1226616 | 1235544 |
TU2666385 | False | 1230 | TUCP | 0.46 | 4 | 1226616 | 1235544 |
TU2666390 | False | 1187 | TUCP | 0.46 | 5 | 1226616 | 1235544 |
TU2666391 | False | 1251 | TUCP | 0.46 | 4 | 1226616 | 1425079 |
TU2666392 | False | 1095 | TUCP | 0.47 | 5 | 1226616 | 1235544 |
TU2666381 | True | 3722 | lncRNA | 0.41 | 4 | 1415575 | 1425079 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110513705 | exosc9 | coding | downstream | 23378 | 1192764 ~ 1202030 (-) |
LOC110513306 | LOC105006014 | coding | downstream | 112032 | 1098558 ~ 1113376 (-) |
LOC110513304 | NA | coding | downstream | 146834 | 1077670 ~ 1078814 (-) |
LOC118946760 | LOC106610545 | coding | downstream | 275920 | 806485 ~ 949488 (-) |
LOC110519451 | NA | coding | downstream | 429426 | 733803 ~ 805684 (-) |
LOC118946762 | LOC106591691 | coding | upstream | 469288 | 1875707 ~ 1896708 (-) |
LOC110511350 | LOC106601386 | coding | upstream | 509427 | 1934506 ~ 1953566 (-) |
LOC118946763 | LOC106591540 | coding | upstream | 584461 | 2009540 ~ 2012481 (-) |
LOC110497191 | LOC106597766 | coding | upstream | 729656 | 2154735 ~ 2176616 (-) |
LOC118946770 | NA | coding | upstream | 813883 | 2238654 ~ 2239683 (-) |
G2330925 | NA | non-coding | downstream | 34886 | 1156067 ~ 1190522 (-) |
G2330931 | NA | non-coding | downstream | 36959 | 1185643 ~ 1188449 (-) |
G2330927 | NA | non-coding | downstream | 37799 | 1183475 ~ 1187609 (-) |
G2330933 | NA | non-coding | downstream | 79968 | 1123988 ~ 1145440 (-) |
G2330924 | NA | non-coding | downstream | 103503 | 1119718 ~ 1121905 (-) |
G2331386 | NA | non-coding | upstream | 2096 | 1427175 ~ 1432004 (-) |
G2331390 | NA | non-coding | upstream | 26009 | 1451088 ~ 1481490 (-) |
G2331391 | NA | non-coding | upstream | 45368 | 1470447 ~ 1477882 (-) |
G2331406 | NA | non-coding | upstream | 96868 | 1521947 ~ 1578042 (-) |
G2331426 | NA | non-coding | upstream | 155871 | 1580950 ~ 1582042 (-) |
G2330705 | LOC106597013 | other | downstream | 540578 | 664211 ~ 684830 (-) |
G2330702 | NA | other | downstream | 590529 | 633911 ~ 634879 (-) |
G2330314 | NA | other | downstream | 1184298 | 39516 ~ 41110 (-) |
G2331536 | LOC106601386 | other | upstream | 526018 | 1951097 ~ 1993315 (-) |
G2331554 | LOC106601385 | other | upstream | 612808 | 2037887 ~ 2039068 (-) |
G2331771 | NA | other | upstream | 1116963 | 2542042 ~ 2544584 (-) |
G2331942 | LOC106602138 | other | upstream | 1381893 | 2755110 ~ 2809111 (-) |