G2331536 (LOC106601386)



Basic Information


Item Value
gene id G2331536
gene name LOC106601386
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493658.1
NCBI id JAAXML020000857.1
chromosome length 2864942
location 1951097 ~ 1993315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2666691
GTGTAGAAGAATGTATGATCTCCGtcctggactcacagtgatctgctcagATCTCCTGGTCCAGCCTGATATCTTCCTGACTGACCCAATGGGAGGGGTCTTCAGGGGCCACCAGGGGCCCGAGATGTTCAGGGGCTACAACTTCACCATCACCTGCTCCACTCAGCCACAGTACCCAGGAGGCTCCTTCCTCCTCACATTCACCGGCACCAACAGAACCCAGACCCAGccagctgtcaatcactctgctgcct

Function


NR:

description
deleted in malignant brain tumors 1 protein-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2666691 True 254 TUCP 0.57 2 1951097 1993315
Loading

Neighbor


gene id symbol gene type direction distance location
LOC118946762 LOC106591691 coding downstream 54389 1875707 ~ 1896708 (-)
LOC110518942 LOC106591068 coding downstream 524761 1418841 ~ 1426336 (-)
LOC110513025 exosc9 coding downstream 557381 1385260 ~ 1393716 (-)
LOC110511394 LOC106591068 coding downstream 714279 1227411 ~ 1236818 (-)
LOC110513705 exosc9 coding downstream 749067 1192764 ~ 1202030 (-)
LOC118946763 LOC106591540 coding upstream 16225 2009540 ~ 2012481 (-)
LOC110497191 LOC106597766 coding upstream 161420 2154735 ~ 2176616 (-)
LOC118946770 NA coding upstream 245647 2238654 ~ 2239683 (-)
G2331523 NA non-coding downstream 58532 1872479 ~ 1892565 (-)
G2331528 NA non-coding downstream 61157 1883267 ~ 1889940 (-)
G2331524 LOC106597013 non-coding downstream 76785 1873470 ~ 1874312 (-)
G2331521 NA non-coding downstream 80743 1870117 ~ 1870354 (-)
G2331549 NA non-coding upstream 22344 2015659 ~ 2016595 (-)
G2331555 LOC106601385 non-coding upstream 45857 2039172 ~ 2039670 (-)
G2331556 NA non-coding upstream 46907 2040222 ~ 2045708 (-)
G2331562 NA non-coding upstream 52308 2045623 ~ 2055072 (-)
G2331564 NA non-coding upstream 69395 2062710 ~ 2063715 (-)
G2331305 NA other downstream 526018 1225408 ~ 1425079 (-)
LOC118946760 LOC106610545 other downstream 1132504 806485 ~ 949488 (-)
G2330705 LOC106597013 other downstream 1266267 664211 ~ 684830 (-)
G2331554 LOC106601385 other upstream 44572 2037887 ~ 2039068 (-)
G2331771 NA other upstream 548727 2542042 ~ 2544584 (-)
G2331942 LOC106602138 other upstream 813657 2755110 ~ 2809111 (-)

Expression


G2331536(LOC106601386) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G2331536(LOC106601386) Expression in each Bioproject

Bar chart with 8 bars.
G2331536(LOC106601386) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network