G2331825


Basic Information

Item Value
gene id G2331825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493658.1
NCBI id JAAXML020000857.1
chromosome length 2864942
location 2599581 ~ 2600509 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2667062
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtgggtcCTCTGTCAGTAGGTCCTCTGTCAGTAGgtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTATGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGgTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667064
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtgggtcCTCTGTCAGTAGgtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTATGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667065
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtgggtcCTCTGTCAGTAGGTCCTCTGTCAGTAGgtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTATgtcctctgtcagtgggtcCTCTGTCAGTAGGTCCTCTGGCAGTATGTCCTCTGTCCGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667067
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtgggtcCTCTGTCAGTAGGTCCTCTGTCAGTAGgtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTATGTCCTCTGTCCgtagGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGgTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667069
TCTATCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTATGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTcagctggtcctctgtcagtaggTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667072
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtgggtcCTCTGTCAGTAGGTCCTCTGTCAGTAGgtcctctgtcagtggttCCTCTGTCAGTAGgtcctctgtcagtgggttCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTcagctggtcctctgtcagtaggTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg
>TU2667073
GGTCCTCTGTcagctggtcctctgtcagtgggtcTTCTGTCAGTAGGTCCTCTGTCAgtaggtcctctgtcagtggttCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGCTGGTCCTCTATCAgtaggtcctctgtcagtggtgCCTCTCTCAGTAGGTCCTCTGTcagctggtcctctgtcagtaggTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTAGGTCCTCTGTCAGTaggtg

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2667062 False 259 lncRNA 0.54 5 2599581 2600379
TU2667064 False 214 lncRNA 0.54 4 2599581 2600379
TU2667065 False 244 lncRNA 0.55 3 2599581 2600379
TU2667067 False 274 lncRNA 0.54 5 2599581 2600379
TU2667069 False 209 lncRNA 0.53 5 2599581 2600509
TU2667072 False 304 lncRNA 0.55 5 2599581 2600379
TU2667073 True 289 lncRNA 0.55 4 2599581 2600379
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118946770 NA coding downstream 359974 2238654 ~ 2239683 (-)
LOC110497191 LOC106597766 coding downstream 422965 2154735 ~ 2176616 (-)
LOC118946763 LOC106591540 coding downstream 587100 2009540 ~ 2012481 (-)
LOC110511350 LOC106601386 coding downstream 646015 1934506 ~ 1953566 (-)
LOC118946762 LOC106591691 coding downstream 702873 1875707 ~ 1896708 (-)
G2331808 NA non-coding downstream 16684 2582517 ~ 2582897 (-)
G2331795 NA non-coding downstream 32551 2566812 ~ 2567030 (-)
G2331793 NA non-coding downstream 32851 2566502 ~ 2566730 (-)
G2331770 NA non-coding downstream 60265 2539075 ~ 2539316 (-)
G2331759 NA non-coding downstream 77594 2521004 ~ 2521987 (-)
G2331827 NA non-coding upstream 393 2600902 ~ 2601158 (-)
G2331831 NA non-coding upstream 1947 2602456 ~ 2614567 (-)
G2331839 NA non-coding upstream 18138 2618647 ~ 2619478 (-)
G2331854 NA non-coding upstream 45365 2645874 ~ 2646220 (-)
G2331860 NA non-coding upstream 49901 2650410 ~ 2650636 (-)
G2331771 NA other downstream 54997 2542042 ~ 2544584 (-)
G2331554 LOC106601385 other downstream 560513 2037887 ~ 2039068 (-)
G2331536 LOC106601386 other downstream 606266 1951097 ~ 1993315 (-)
G2331305 NA other downstream 1174502 1225408 ~ 1425079 (-)
G2331942 LOC106602138 other upstream 206463 2755110 ~ 2809111 (-)

Expression

G2331825 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 200.
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G2331825 Expression in each Bioproject

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G2331825 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 4000.
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Co-expression Network