LOC110517278 (LOC106596232)


Basic Information

Item Value
gene id LOC110517278
gene name LOC106596232
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 555508 ~ 648529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971950.1
CTTCTATCCTCCCCGTCCTGCGGGCACCAGGACCGGCTGCTTGGCGTCTGTCTCGCGCCTGGCCGGTTGGAGGTTATTTTTAGTGTCCGGTTGGTTCGTGTTGCAGTGTGGGGAGTCACGATAGATCATTTTCCTCTACAGCCCAACCGGGAGACGCTCACGCCGAGTTACGGAGAATCCTGGTAGAATAACGGATATAACAGATACGGGCCCTCCGTGAGCCTTAACCGGTGGAATAACAAGCCCAGCTGTCCGGTAGGAATTAAGGGACGACATTGCCGAGCTTTTCTTAACGGAGAAAGGATATTTAAACCCCACGAACGCACCATAGCCTACTGAAGCCGTTATCAGAGATGGCCAGCACCGGGACTGAGCGCGAGGAACCTCACGTTCCCCTGGACAAACTGAGACATCCCGAGCCTGCATTCAGAGAGGCGCAGAAGTGGATCGAGGAGGTGACGGGAAAAAGTTTCGGTGAGAAGGACTTCCGGAGCGGCCTGGAGAACGGGATCCTGCTATGCGAGTTACTGTGTTCCATCAGACCAGGTTTGGTCCAGAAAATCAACAGACTACCGTCGCCCATCGCTGGACTGGACAACCTGTCAGTGTTCCTCAGAGGCTGTGAGGAGTTGGGTCTGAAAGGTTCCCAGCTGTTTAATCCGGGAGACCTTCAGGACACCTCCATACAAGCCAACctcagGGACTCAGAATGCAGTAGAAAACTGAAGAATGTATTAATTACAATATTCTGGCTGGGGAAGGCATCCAATGTGTGTCCCTCCTATGACGGCCCTGTCCTAAACCTCAGAGAGTTTGAGGGACTGCGATCACACATGAGAACGctgagtGAGGACAGGTCTGGGTCAGACAGTGTGAGGCCAGGTGTGAGGGACAGTGGTTACGACTGCTGGGACTCAGAGcggagtcagtctctctctccccgacaACACACACGGGACAACTCCCTGGACAgCCTGGATTCTTTTGGCTCGCGCTCCCAGACTAGCCCCTCCCCCGATGTCATCATCCATGGCAACAGTGATGTTGACTCAGACGGCGATGCCCCCAACAGGAAGGGAGATGTCCGTCGTGATGACATGTTAGCTCGTCGTACGTCGGCCGGTGAATCACGGACCTTTGTTCCCTTTAACCAGTTCCTGCCCAATCGGAACGTCTCTGCCTACGTTCCCACCGCCAGACGCAGATCACGGCCCCAGGATGGAGAGCAcggcaggttgAGCAGGAGAGTGTCTAAGATGTCTGAGGAGTTGGAGAGCATAAGTATAATTAACATGCACAGCGAGGAAGAGGGGGCGGGACTACTTCAGCCTCTCGGCCAATCACGATATGACGGCATGCAGGAACAGTACACCAAtcaccaggaggaggaggaatggcaaGACGACCTAGCCCGGTGGAAGAGTCGTCGCCGCAGTGCTTCTCAGGATCTGAtcaggaaagaggaggagaggaagcggatggagaggatgatgaaggaggaggagggaggccaCACCCAGAAGAAGAAGAACATCAAGACGTACAGAGAGATCGTAGAGGACAAAGAGCGTAGGGAGGCGGAGCTGTGTGATGCGTACAGGAGGGCGGGCTCTAAGGCGGAAGCTGCCATGGTTCTCCAGCGTTACGCTCTCCGCTTCACCATCAGTGATTCAACGCTGGACAGTCTGCAGCTACCTAGaaccattactactgaccagaaccCTGATTCTAGAACACCTGCTACCAACCAGAACCCTGAGTTTAGAACCACTACTACCAACCAGAATCTTGAGTCTAGAACCATTACTACCAACCAGAACCCTGAGTCTAAAACCATCACTACTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCAGTATTAATAACCAGAACTCTGAGTCTACaaccattactactgaccagaactCTGAGTCTACaaccattactactgaccagaaccCAGAGTCTAGaaccattactactgaccagaaccTTGAGTCTAGAACCATTAGTACTGACCAGAACCCTAAGTCTAGAACCATTACCTCTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCATTATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACCAGAACCCTGAGTCTAGAACCATTACCCCTGACCAGAACCCTGAGTCTAGAACCATTATTACTGACCAGAACCCTGAGTCTAGAAGCATAATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACTACAACCCCGACTCTGACCCTGACAACCCAGAACGAGCTGGAAACGGACTAGAGGCCCTGCAGACTGACACAAAGCAAGAGCCCcgagccccccccaaaaaacaaatctctgtcacacacacccaacacacacagctcCAAACCCAAAACACCCAACACacccaacacacgcacacacaaaaccACTCCACACAAAGTCAGCACACActcccccctcccatctcccccCCCTCCCGGCCCCTCCCTCTCCTAACAGCCAAGCCCTACTGCCAGCCACCAGAGACACAGCCTGGACACAATCCTGTTAAGGTAGATGGCTTGGTGAGGGTGAATGGAGAGACTCTCCCGTCCTCCCCGCCTTCCTCAGCCCTTCAATCCCCCTCCTCACCCATTCACTCCCCCCCACCCACCGAACACCCTGGTGCCAATCAGAAGACACAGGTGTCGGCCGTCAGCGCCCTGATTGGAGGGAGGAACTGTGTTGTCACGACGACCATTGTGACGGAACTTACCCAGACACACCTGCAGCCACGTCCGTTAGATATGCTCAGCAACACACAGGTGAACGGCTCCATGGCATTGTCAAGGAGATCAGGGGAGGAGGCGGGGTCTGACTCTTCATTGCTTAGTAACCAGCACACCTACTCATCCTCGGTGACAGGAGGACTGGAGGGGAGCAGTGGGACGatggAGAGCCCCATGTTGAACCTGGCTAAGCGTGTAGATCACTGGGTGTGGAACCCTGAGGATGAGAGGAGACGACAGGAGAAGTGGCAGCAGGAGCAGGAGAGATTCCTACAGgagCAGTACCTCAGGGAGCAGGATAAACTgaaaggggagtgggagagagcgcagagagaggTGGACGAGGAAGAACGAAGACACAATGAAGAGGAGAAGAAGATCCTGGAGGAGACGGCAACGGCCCTTTCTCATCCACCTCCCACAGAGCTCGCTGTTCAGACAGAAGTGATCGTTCCGGCACAACAGATCTatGCATCATGGGACTGTGAGTCATCCAGGGGTCAGGAGACGTCTCTGGACCGCAACCAGCCCTGCGCCGTCAAGAGGTCAGGATCGTATGAGGGCCCACATCCACCTTCATCATCCCCATCATCACCTCAACCGCCCTCCCCCAGCAGgtgtgtgaGTGGTAAGCGTCAGTGTTCAGGTTGCAATCAGGCGCTGGGGAAAGGAACAGCTATGAATATCGACACGCTGGGCCTGTACTTCCACCTAACCTGCtttaagtgtggAGTGTGTAAGGTACAGCTAGGTGACACCAGTTCAGGAACAGACGTTAGGATCCGTAACGGGCTGCTGAGCTGTCACGACTGCTATGCCACATCAcacgTTGGCCAGCCGACTACGCTGTGATTGGCTACAGCCTGCATCTGGAACCCTTCACAACATTCTGGAACGCTGTGGAATTCTCTTAACTGGACACACAAACTTCTCCCAGATGATGTCATGGAGACTGAACTGTCTGATGCTAACTGATGCTAATGGAGGCTAACTGCTAAGTGCTAGCGTTGTAGCTGATCAACCAGTTTTTCCCAGACTGACTTGAGTACAGAGACCTGAAGCA
>XM_036971951.1
TTCTATCCTCCCCGTCCTGCGGGCACCAGGACCGGCTGCTTGGCGTCTGTCTCGCGCCTGGCCGGTTGGAGGTTATTTTTAGTGTCCGGTTGGTTCGTGTTGCAGTGTGGGGAGTCACGATAGATCATTTTCCTCTACAGCCCAACCGGGAGACGCTCACGCCGAGTTACGGAGAATCCTGGTAGAATAACGGATATAACAGATACGGGCCCTCCGTGAGCCTTAACCGGTGGAATAACAAGCCCAGCTGTCCGGTAGGAATTAAGGGACGACATTGCCGAGCTTTTCTTAACGGAGAAAGGATATTTAAACCCCACGAACGCACCATAGCCTACTGAAGCCGTTATCAGAGATGGCCAGCACCGGGACTGAGCGCGAGGAACCTCACGTTCCCCTGGACAAACTGAGACATCCCGAGCCTGCATTCAGAGAGGCGCAGAAGTGGATCGAGGAGGTGACGGGAAAAAGTTTCGGTGAGAAGGACTTCCGGAGCGGCCTGGAGAACGGGATCCTGCTATGCGAGTTACTGTGTTCCATCAGACCAGGTTTGGTCCAGAAAATCAACAGACTACCGTCGCCCATCGCTGGACTGGACAACCTGTCAGTGTTCCTCAGAGGCTGTGAGGAGTTGGGTCTGAAAGGTTCCCAGCTGTTTAATCCGGGAGACCTTCAGGACACCTCCATACAAGCCAACctcagGGACTCAGAATGCAGTAGAAAACTGAAGAATGTATTAATTACAATATTCTGGCTGGGGAAGGCATCCAATGTGTGTCCCTCCTATGACGGCCCTGTCCTAAACCTCAGAGAGTTTGAGGGACTGCGATCACACATGAGAACGctgagtGAGGACAGGTCTGGGTCAGACAGTGTGAGGCCAGGTGTGAGGGACAGTGGTTACGACTGCTGGGACTCAGAGcggagtcagtctctctctccccgacaACACACACGGGACAACTCCCTGGACAgCCTGGATTCTTTTGGCTCGCGCTCCCAGACTAGCCCCTCCCCCGATGTCATCATCCATGGCAACAGTGATGTTGACTCAGACGGCGATGCCCCCAACAGGAAGGGAGATGTCCGTCGTGATGACATGTTAGCTCGTCGTACGTCGGCCGGTGAATCACGGACCTTTGTTCCCTTTAACCAGTTCCTGCCCAATCGGAACGTCTCTGCCTACGTTCCCACCGCCAGACGCAGATCACGGCCCCAGGATGGAGAGCAcggcaggttgAGCAGGAGAGTGTCTAAGATGTCTGAGGAGTTGGAGAGCATAAGTATAATTAACATGCACAGCGAGGAAGAGGGGGCGGGACTACTTCAGCCTCTCGGCCAATCACGATATGACGGCATGCAGGAACAGTACACCAAtcaccaggaggaggaggaatggcaaGACGACCTAGCCCGGTGGAAGAGTCGTCGCCGCAGTGCTTCTCAGGATCTGAtcaggaaagaggaggagaggaagcggatggagaggatgatgaaggaggaggagggaggccaCACCCAGAAGAAGAAGAACATCAAGACGTACAGAGAGATCGTAGAGGACAAAGAGCGTAGGGAGGCGGAGCTGTGTGATGCGTACAGGAGGGCGGGCTCTAAGGCGGAAGCTGCCATGGTTCTCCAGCGTTACGCTCTCCGCTTCACCATCAGTGATTCAACGCTGGACAGTCTGCAGCTACCTAGaaccattactactgaccagaaccCTGATTCTAGAACACCTGCTACCAACCAGAACCCTGAGTTTAGAACCACTACTACCAACCAGAATCTTGAGTCTAGAACCATTACTACCAACCAGAACCCTGAGTCTAAAACCATCACTACTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCAGTATTAATAACCAGAACTCTGAGTCTACaaccattactactgaccagaactCTGAGTCTACaaccattactactgaccagaaccCAGAGTCTAGaaccattactactgaccagaaccTTGAGTCTAGAACCATTAGTACTGACCAGAACCCTAAGTCTAGAACCATTACCTCTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCATTATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACCAGAACCCTGAGTCTAGAACCATTACCCCTGACCAGAACCCTGAGTCTAGAACCATTATTACTGACCAGAACCCTGAGTCTAGAAGCATAATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACTACAACCCCGACTCTGACCCTGACAACCCAGAACGAGCTGGAAACGGACTAGAGGCCCTGCAGACTGACACAAAGCAAGAGCCCcgagccccccccaaaaaacaaatctctgtcacacacacccaacacacacagctcCAAACCCAAAACACCCAACACacccaacacacgcacacacaaaaccACTCCACACAAAGTCAGCACACActcccccctcccatctcccccCCCTCCCGGCCCCTCCCTCTCCTAACAGCCAAGCCCTACTGCCAGCCACCAGAGACACAGCCTGGACACAATCCTGTTAAGGTAGATGGCTTGGTGAGGGTGAATGGAGAGACTCTCCCGTCCTCCCCGCCTTCCTCAGCCCTTCAATCCCCCTCCTCACCCATTCACTCCCCCCCACCCACCGAACACCCTGGTGCCAATCAGAAGACACAGGTGTCGGCCGTCAGCGCCCTGATTGGAGGGAGGAACTGTGTTGTCACGACGACCATTGTGACGGAACTTACCCAGACACACCTGCAGCCACGTCCGTTAGATATGCTCAGCAACACACAGGTGAACGGCTCCATGGCATTGTCAAGGAGATCAGGGGAGGAGGCGGGGTCTGACTCTTCATTGCTTAGTAACCAGCACACCTACTCATCCTCGGTGACAGGAGGACTGGAGGGGAGCAGTGGGACGatggAGAGCCCCATGTTGAACCTGGCTAAGCGTGTAGATCACTGGGTGTGGAACCCTGAGGATGAGAGGAGACGACAGGAGAAGTGGCAGCAGGAGCAGGAGAGATTCCTACAGgagCAGTACCTCAGGGAGCAGGATAAACTgaaaggggagtgggagagagcgcagagagaggTGGACGAGGAAGAACGAAGACACAATGAAGAGGAGAAGAAGATCCTGGAGGAGACGGCAACGGCCCTTTCTCATCCACCTCCCACAGAGCTCGCTGTTCAGACAGAAGTGATCGTTCCGGCACAACAGATCTatGCATCATGGGACTGTGAGTCATCCAGGGGTCAGGAGACGTCTCTGGACCGCAACCAGCCCTGCGCCGTCAAGAGgtgtgtgaGTGGTAAGCGTCAGTGTTCAGGTTGCAATCAGGCGCTGGGGAAAGGAACAGCTATGAATATCGACACGCTGGGCCTGTACTTCCACCTAACCTGCtttaagtgtggAGTGTGTAAGGTACAGCTAGGTGACACCAGTTCAGGAACAGACGTTAGGATCCGTAACGGGCTGCTGAGCTGTCACGACTGCTATGCCACATCAcacgCAGTTGGCCAGCCGACTACGCTGTGATTGGCTACAGCCTGCATCTGGAACCCTTCACAACATTCTGGAACGCTGTGGAATTCTCTTAACTGGACACACAAACTTCTCCCAGATGATGTCATGGAGACTGAACTGTCTGATGCTAACTGATGCTAATGGAGGCTAACTGCTAAGTGCTAGCGTTGTAGCTGATCAACCAGTTTTTCCCAGACTGACTTGAGTACAGAGACCTGAAGCA
>XM_036971949.1
TCTATCCTCCCCGTCCTGCGGGCACCAGGACCGGCTGCTTGGCGTCTGTCTCGCGCCTGGCCGGTTGGAGGTTATTTTTAGTGTCCGGTTGGTTCGTGTTGCAGTGTGGGGAGTCACGATAGATCATTTTCCTCTACAGCCCAACCGGGAGACGCTCACGCCGAGTTACGGAGAATCCTGGTAGAATAACGGATATAACAGATACGGGCCCTCCGTGAGCCTTAACCGGTGGAATAACAAGCCCAGCTGTCCGGTAGGAATTAAGGGACGACATTGCCGAGCTTTTCTTAACGGAGAAAGGATATTTAAACCCCACGAACGCACCATAGCCTACTGAAGCCGTTATCAGAGATGGCCAGCACCGGGACTGAGCGCGAGGAACCTCACGTTCCCCTGGACAAACTGAGACATCCCGAGCCTGCATTCAGAGAGGCGCAGAAGTGGATCGAGGAGGTGACGGGAAAAAGTTTCGGTGAGAAGGACTTCCGGAGCGGCCTGGAGAACGGGATCCTGCTATGCGAGTTACTGTGTTCCATCAGACCAGGTTTGGTCCAGAAAATCAACAGACTACCGTCGCCCATCGCTGGACTGGACAACCTGTCAGTGTTCCTCAGAGGCTGTGAGGAGTTGGGTCTGAAAGGTTCCCAGCTGTTTAATCCGGGAGACCTTCAGGACACCTCCATACAAGCCAACctcagGGACTCAGAATGCAGTAGAAAACTGAAGAATGTATTAATTACAATATTCTGGCTGGGGAAGGCATCCAATGTGTGTCCCTCCTATGACGGCCCTGTCCTAAACCTCAGAGAGTTTGAGGGACTGCGATCACACATGAGAACGctgagtGAGGACAGGTCTGGGTCAGACAGTGTGAGGCCAGGTGTGAGGGACAGTGGTTACGACTGCTGGGACTCAGAGcggagtcagtctctctctccccgacaACACACACGGGACAACTCCCTGGACAgCCTGGATTCTTTTGGCTCGCGCTCCCAGACTAGCCCCTCCCCCGATGTCATCATCCATGGCAACAGTGATGTTGACTCAGACGGCGATGCCCCCAACAGGAAGGGAGATGTCCGTCGTGATGACATGTTAGCTCGTCGTACGTCGGCCGGTGAATCACGGACCTTTGTTCCCTTTAACCAGTTCCTGCCCAATCGGAACGTCTCTGCCTACGTTCCCACCGCCAGACGCAGATCACGGCCCCAGGATGGAGAGCAcggcaggttgAGCAGGAGAGTGTCTAAGATGTCTGAGGAGTTGGAGAGCATAAGTATAATTAACATGCACAGCGAGGAAGAGGGGGCGGGACTACTTCAGCCTCTCGGCCAATCACGATATGACGGCATGCAGGAACAGTACACCAAtcaccaggaggaggaggaatggcaaGACGACCTAGCCCGGTGGAAGAGTCGTCGCCGCAGTGCTTCTCAGGATCTGAtcaggaaagaggaggagaggaagcggatggagaggatgatgaaggaggaggagggaggccaCACCCAGAAGAAGAAGAACATCAAGACGTACAGAGAGATCGTAGAGGACAAAGAGCGTAGGGAGGCGGAGCTGTGTGATGCGTACAGGAGGGCGGGCTCTAAGGCGGAAGCTGCCATGGTTCTCCAGCGTTACGCTCTCCGCTTCACCATCAGTGATTCAACGCTGGACAGTCTGCAGCTACCTAGaaccattactactgaccagaaccCTGATTCTAGAACACCTGCTACCAACCAGAACCCTGAGTTTAGAACCACTACTACCAACCAGAATCTTGAGTCTAGAACCATTACTACCAACCAGAACCCTGAGTCTAAAACCATCACTACTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCAGTATTAATAACCAGAACTCTGAGTCTACaaccattactactgaccagaactCTGAGTCTACaaccattactactgaccagaaccCAGAGTCTAGaaccattactactgaccagaaccTTGAGTCTAGAACCATTAGTACTGACCAGAACCCTAAGTCTAGAACCATTACCTCTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCATTATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACCAGAACCCTGAGTCTAGAACCATTACCCCTGACCAGAACCCTGAGTCTAGAACCATTATTACTGACCAGAACCCTGAGTCTAGAAGCATAATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACTACAACCCCGACTCTGACCCTGACAACCCAGAACGAGCTGGAAACGGACTAGAGGCCCTGCAGACTGACACAAAGCAAGAGCCCcgagccccccccaaaaaacaaatctctgtcacacacacccaacacacacagctcCAAACCCAAAACACCCAACACacccaacacacgcacacacaaaaccACTCCACACAAAGTCAGCACACActcccccctcccatctcccccCCCTCCCGGCCCCTCCCTCTCCTAACAGCCAAGCCCTACTGCCAGCCACCAGAGACACAGCCTGGACACAATCCTGTTAAGGTAGATGGCTTGGTGAGGGTGAATGGAGAGACTCTCCCGTCCTCCCCGCCTTCCTCAGCCCTTCAATCCCCCTCCTCACCCATTCACTCCCCCCCACCCACCGAACACCCTGGTGCCAATCAGAAGACACAGGTGTCGGCCGTCAGCGCCCTGATTGGAGGGAGGAACTGTGTTGTCACGACGACCATTGTGACGGAACTTACCCAGACACACCTGCAGCCACGTCCGTTAGATATGCTCAGCAACACACAGGTGAACGGCTCCATGGCATTGTCAAGGAGATCAGGGGAGGAGGCGGGGTCTGACTCTTCATTGCTTAGTAACCAGCACACCTACTCATCCTCGGTGACAGGAGGACTGGAGGGGAGCAGTGGGACGatggAGAGCCCCATGTTGAACCTGGCTAAGCGTGTAGATCACTGGGTGTGGAACCCTGAGGATGAGAGGAGACGACAGGAGAAGTGGCAGCAGGAGCAGGAGAGATTCCTACAGgagCAGTACCTCAGGGAGCAGGATAAACTgaaaggggagtgggagagagcgcagagagaggTGGACGAGGAAGAACGAAGACACAATGAAGAGGAGAAGAAGATCCTGGAGGAGACGGCAACGGCCCTTTCTCATCCACCTCCCACAGAGCTCGCTGTTCAGACAGAAGTGATCGTTCCGGCACAACAGATCTatGCATCATGGGACTGTGAGTCATCCAGGGGTCAGGAGACGTCTCTGGACCGCAACCAGCCCTGCGCCGTCAAGAGGTCAGGATCGTATGAGGGCCCACATCCACCTTCATCATCCCCATCATCACCTCAACCGCCCTCCCCCAGCAGgtgtgtgaGTGGTAAGCGTCAGTGTTCAGGTTGCAATCAGGCGCTGGGGAAAGGAACAGCTATGAATATCGACACGCTGGGCCTGTACTTCCACCTAACCTGCtttaagtgtggAGTGTGTAAGGTACAGCTAGGTGACACCAGTTCAGGAACAGACGTTAGGATCCGTAACGGGCTGCTGAGCTGTCACGACTGCTATGCCACATCAcacgCAGTTGGCCAGCCGACTACGCTGTGATTGGCTACAGCCTGCATCTGGAACCCTTCACAACATTCTGGAACGCTGTGGAATTCTCTTAACTGGACACACAAACTTCTCCCAGATGATGTCATGGAGACTGAACTGTCTGATGCTAACTGATGCTAATGGAGGCTAACTGCTAAGTGCTAGCGTTGTAGCTGATCAACCAGTTTTTCCCAGACTGACTTGAGTACAGAGACCTGAAGCA
>XM_036971952.1
AAGGACTTCCGGAGCGGCCTGGAGAACGGGATCCTGCTATGCGAGACAACCTGTCAGTGTTCCTCAGAGGCTGTGAGGAGTTGGGTCTGAAAGGTTCCCAGCTGTTTAATCCGGGAGACCTTCAGGACACCTCCATACAAGCCAACctcagGGACTCAGAATGCAGTAGAAAACTGAAGAATGTATTAATTACAATATTCTGGCTGGGGAAGGCATCCAATGTGTGTCCCTCCTATGACGGCCCTGTCCTAAACCTCAGAGAGTTTGAGGGACTGCGATCACACATGAGAACGctgagtGAGGACAGGTCTGGGTCAGACAGTGTGAGGCCAGGTGTGAGGGACAGTGGTTACGACTGCTGGGACTCAGAGcggagtcagtctctctctccccgacaACACACACGGGACAACTCCCTGGACAgCCTGGATTCTTTTGGCTCGCGCTCCCAGACTAGCCCCTCCCCCGATGTCATCATCCATGGCAACAGTGATGTTGACTCAGACGGCGATGCCCCCAACAGGAAGGGAGATGTCCGTCGTGATGACATGTTAGCTCGTCGTACGTCGGCCGGTGAATCACGGACCTTTGTTCCCTTTAACCAGTTCCTGCCCAATCGGAACGTCTCTGCCTACGTTCCCACCGCCAGACGCAGATCACGGCCCCAGGATGGAGAGCAcggcaggttgAGCAGGAGAGTGTCTAAGATGTCTGAGGAGTTGGAGAGCATAAGTATAATTAACATGCACAGCGAGGAAGAGGGGGCGGGACTACTTCAGCCTCTCGGCCAATCACGATATGACGGCATGCAGGAACAGTACACCAAtcaccaggaggaggaggaatggcaaGACGACCTAGCCCGGTGGAAGAGTCGTCGCCGCAGTGCTTCTCAGGATCTGAtcaggaaagaggaggagaggaagcggatggagaggatgatgaaggaggaggagggaggccaCACCCAGAAGAAGAAGAACATCAAGACGTACAGAGAGATCGTAGAGGACAAAGAGCGTAGGGAGGCGGAGCTGTGTGATGCGTACAGGAGGGCGGGCTCTAAGGCGGAAGCTGCCATGGTTCTCCAGCGTTACGCTCTCCGCTTCACCATCAGTGATTCAACGCTGGACAGTCTGCAGCTACCTAGaaccattactactgaccagaaccCTGATTCTAGAACACCTGCTACCAACCAGAACCCTGAGTTTAGAACCACTACTACCAACCAGAATCTTGAGTCTAGAACCATTACTACCAACCAGAACCCTGAGTCTAAAACCATCACTACTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCAGTATTAATAACCAGAACTCTGAGTCTACaaccattactactgaccagaactCTGAGTCTACaaccattactactgaccagaaccCAGAGTCTAGaaccattactactgaccagaaccTTGAGTCTAGAACCATTAGTACTGACCAGAACCCTAAGTCTAGAACCATTACCTCTGACCAGAACCCTGAGTCTAGaaccattactactgaccagaaccctaaccctagaacCATTATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACCAGAACCCTGAGTCTAGAACCATTACCCCTGACCAGAACCCTGAGTCTAGAACCATTATTACTGACCAGAACCCTGAGTCTAGAAGCATAATTACTAACCAGAACCCTGAGTCTAGAACCATTACTGCTGACTACAACCCCGACTCTGACCCTGACAACCCAGAACGAGCTGGAAACGGACTAGAGGCCCTGCAGACTGACACAAAGCAAGAGCCCcgagccccccccaaaaaacaaatctctgtcacacacacccaacacacacagctcCAAACCCAAAACACCCAACACacccaacacacgcacacacaaaaccACTCCACACAAAGTCAGCACACActcccccctcccatctcccccCCCTCCCGGCCCCTCCCTCTCCTAACAGCCAAGCCCTACTGCCAGCCACCAGAGACACAGCCTGGACACAATCCTGTTAAGGTAGATGGCTTGGTGAGGGTGAATGGAGAGACTCTCCCGTCCTCCCCGCCTTCCTCAGCCCTTCAATCCCCCTCCTCACCCATTCACTCCCCCCCACCCACCGAACACCCTGGTGCCAATCAGAAGACACAGGTGTCGGCCGTCAGCGCCCTGATTGGAGGGAGGAACTGTGTTGTCACGACGACCATTGTGACGGAACTTACCCAGACACACCTGCAGCCACGTCCGTTAGATATGCTCAGCAACACACAGGTGAACGGCTCCATGGCATTGTCAAGGAGATCAGGGGAGGAGGCGGGGTCTGACTCTTCATTGCTTAGTAACCAGCACACCTACTCATCCTCGGTGACAGGAGGACTGGAGGGGAGCAGTGGGACGatggAGAGCCCCATGTTGAACCTGGCTAAGCGTGTAGATCACTGGGTGTGGAACCCTGAGGATGAGAGGAGACGACAGGAGAAGTGGCAGCAGGAGCAGGAGAGATTCCTACAGgagCAGTACCTCAGGGAGCAGGATAAACTgaaaggggagtgggagagagcgcagagagaggTGGACGAGGAAGAACGAAGACACAATGAAGAGGAGAAGAAGATCCTGGAGGAGACGGCAACGGCCCTTTCTCATCCACCTCCCACAGAGCTCGCTGTTCAGACAGAAGTGATCGTTCCGGCACAACAGATCTatGCATCATGGGACTGTGAGTCATCCAGGGGTCAGGAGACGTCTCTGGACCGCAACCAGCCCTGCGCCGTCAAGAGGTCAGGATCGTATGAGGGCCCACATCCACCTTCATCATCCCCATCATCACCTCAACCGCCCTCCCCCAGCAGgtgtgtgaGTGGTAAGCGTCAGTGTTCAGGTTGCAATCAGGCGCTGGGGAAAGGAACAGCTATGAATATCGACACGCTGGGCCTGTACTTCCACCTAACCTGCtttaagtgtggAGTGTGTAAGGTACAGCTAGGTGACACCAGTTCAGGAACAGACGTTAGGATCCGTAACGGGCTGCTGAGCTGTCACGACTGCTATGCCACATCAcacgCAGTTGGCCAGCCGACTACGCTGTGATTGGCTACAGCCTGCATCTGGAACCCTTCACAACATTCTGGAACGCTGTGGAATTCTCTTAACTGGACACACAAACTTCTCCCAGATGATGTCATGGAGACTGAACTGTCTGATGCTAACTGATGCTAATGGAGGCTAACTGCTAAGTGCTAGCGTTGTAGCTGATCAACCAGTTTTTCCCAGACTGACTTGAGTACAGAGACCTGAAGCA
>TU2667660
TCCTCCCCGTCCTGCGGGCACCAGGACCGGCTGCTTGGCGTCTGTCTCGCGCCTGGCCGGTTGGAGGTTATTTTTAGTGTCCGGTTGGTTCGTGTTGCAGTGTGGGGAGTCACGATAGATCATTTTCCTCTACAGCCCAACCGGGAGACGCTCACGCCGAGTTACGGAGAATCCTGGTAGAATAACGGATATAACAGATACGGGCCCTCCGTGAGCCTTAACCGGTGGAATAACAAGCCCAGCTGTCCGGTAGGAATTAAGGGACGACATTGCCGAGCTTTTCTTAACGGAGAAAGGATATTTAAACCCCACGAACGCACCATAGCCTACTGAAGCCGTTATCAGAGATGGCCAGCACCGGGACTGAGCGCGAGGAACCTCACGTTCCCCTGGACAAACTGAGACATCCCGAGCCTGCATTCAGAGAGGCGCAGAAGTGGATCGAGGAGGTGACGGGAAAAAGTTTCGGTGAGAAGGACTTCCGGAGCGGCCTGGAGAACGGGATCCTGCTATGCGAGTTACTGTGTTCCATCAGACCAGGTTTGGTCCAGAAAATCAACAGACTACCGTCGCCCATCGCTGGACTGG
>TU2667653
cccagGACAACCTGTCAGTGTTCCTCAGAGGCTGTGAGGAGTTGGGTCTGAAAGGTTCCCAGCTGTTTAATCCGGGAGACCTTCAGGACACCTCCATACAAGCCAACctcaggttagagagagagagaaacgtgtgtgcgtgcgtgcgtatatataaatatatacagtatataactagGCCCCTATCAAGGCCTGAACTGTCCTCCAGAAATCACTCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAGAAATCCCCCAgaaacccttcctctccctatcaaGGCCTGAACTATCCCCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTATCCTCCAGAAATCCCCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCCTCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAGAAATCCCGCAgaaacccttcctctccctatcaaGGCCTGAACTATCCTCCAGAAACCATTCCTCTCCCTATCAAGGCCTGAACTGTCCTCCAGAAATCCCCCAgaaacccttcctctccctatcaaggcctgaactgtcactcagaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAGAaatccttcctctccctatcaAGAACTGAACTGTTCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGAACTGAACTGTCCTCCAgaaacccttcctctccctaCCAAGGCCTGAACTGTCCTCCAGAAACCCTTCCTCCCCCTATCAAGAACTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAgaaacccttcctctccctatcaaGGCCTGAACTGTCCTCCAGAAATCCCCCAgaaacccttcctctccctatcaaGGCCTGATAGGACAGCCTGAGCTTTCAGCCAGTCGAAACATACAGCCTTCGTCTCAAAGACATGGTGAAACCACATGAGCTGCTTCCAGGGCAGCCTGAGCTTTCAGCCAGTCTAAACATACAGCCTTTGTCTCAAAGACATGGTGAAACCACATGAGCTGGTTCCAGGACAGCCTGAGCTTTCAGCCAGTCGAAACATACAAGTCAACGTGATTCACATGACTGTGGTCAACTCCAACCCAGCTAACAGCCTTCGTCTCAAAGACATGATGAAACCACATGACTGTGGTCAACTCCAACCCGGCTTAACAGCCGTCGTCTCAAAGACATGGGGAAACCACATGACTGTGGCCAACTAACAACCTTCGTCAACTCGTTCTAGTCATCTTACTTACAACCAGTTAGCGAAGCTAAACACGGATAATGATTCCGCTTCCGGTGAGGCACGGTGTCCGTTGTCCCTCAGTAGGTGAGGCACGTGTCCGTTGTCCCTCAGTAGGTGAGGCACGGTGTCCGTTGTCCCTTAGTAGGTGAGGCACGGTGTCCGTTGTCCCTCAGTAGGTGAGGCACGGTGTCCGTTGTCCCTTAGTAGGTGAGGCACGGTGTCCGTTGTCCCTCAGTAGGTGAGGCACGGTGTCCGTTGGCCCTCAGTAGGTGAGGCACGGTGTCCGTTGGCCCTCAGTAGAGGGCGCTAGCGTGCAAACTCCCCATACATTTGTTGTACGGAGTTGACAGACTGAAagtgacctctcctctccttttctcttcagGGACTCAGAATGCAGTAGAAAACTGAAGAATGTATTAATTACAATATTCTGGCTGGGGAAGGCATCCAATGTGTGTCCCTCCTATGACGGCCCTGTCCTAAACCTCAGAGAGTTTGAGGGACTGCGATCACACATGAGAACGctgagtGAGGACAGGTCTGGGTCAGACAGTGTGAGGCCAGGTGTGAGGGACAGTGGTTACGACTGCTGGGACTCAGAGcggagtcagtctctctctccccgacaACACACACGGGACAACTCCCTGGACAgCCTGGATTCTTTTGGCTCGCGCTCCCAGACTAGCCCCTCCCCCGATGTCATCATCCATGGCAACAGTGATGTTGACTCAGACGGCGATGCCCCCAACAGGAAGGGAGATGTCCGTCGTGATGACATGTTAGCTCGTCGTACGTCGGCCGGTGAATCACGGACCTTTGTTCCCTTTAACCAGTTCCTGCCCAATCGGAACGTCTCTGCCTACGTTCCCACCGCCAGACGCAGATCACGGCCCCAGGATGGAGAGCAcggcaggtacacacacacatacacacacacaggtaggtacacatacacacacacacacacaggtaggtacacatacacacacagacacacacacacaaggggacgtacacagacacacatgctctTATTAAAgatccctccccttcccctccctccttcccttccctccttcccttccctccttcccctccctccttcccctccct
>TU2667672
CCACACCACCCCAAATCTAATAATACCTCAcaccaccccaaatctaatgataccccacaccaccccaaatctaatgataccccacaccaccccaaatctaatgatacctcacaccaccccaaatctaatgatacCCCACACCACCCGAAATCTAATGATACCCCACACCAAGGTAACCTCTCATCACTCTGTCTACAGGTAGATGGTTTGGTGAGTTAACCTCTCATCACTCTGTCTACAGGTAGATGGCTTGGTGAGGGTGAATGGAGAGACTCTCCCGTCCTCCCCGCCTTCCTCAGCCCTTCAATCCCCCTCCTCACCCATTCACTCCCCCCCACCCACCGAACACCCTGGTGCCAATCAGAAGACACAGGTGTCGGCCGTCAGCGCCCTGATTGGAGGGAGGAACTGTGTTGTCACGACGACCATTGTGACGGAACTTACCCAGACACACCTGCAGCCACGTCCGTTAGATATGCTCAGCAACACACAGGTGAACGGCTCCATGGCATTGTCAAGGAGATCAGGGGAGGAGGCGGGGTCTGACTCTTCATTGCTTAGTAACCAGCACACCTACTCATCCTCGGTGACAGGAGGACTGGAGGGGAGCAGTGGGACGG
>TU2667638
TCAGGGAGCAGGATAAACTgaaaggggagtgggagagagcgcagagagaggTGGACGAGGAAGAACGAAGACACAATGAAGAGGAGAAGAAGATCCTGGAGGAGACGGCAACGGCCCTTTCTCATCCACCTCCCACAGAGCTCGCTGTTCAGACAGAAGTGATCGTTCCGGCACAACAGATCTatGCATCATGGGACTGTGAGTCATCCAGGGGTCAGGAGACGTCTCTGGACCGCAACCAGCCCTGCGCCGTCAAGAGGTCAGGATCGTATGAGGGCCCACATCCACCTTCATCATCCCCATCATCACCTCAACCGCCCTCCCCCAGCAGgtgtgtgaGTGGTAAGCGTCAGTGTTCAGGTTGCAATCAGGCGCTGGGGAAAGGAACAGCTATGAATATCGACACGCTGGGCCTGTACTTCCACCTAACCTGCtttaagtgtggAGTGTGTAAGGTACAGCTAGGTGACACCAGTTCAGGAACAGACGTTAGGATCCGTAACGGGCTGCTGAGCTGTCACGACTGCTATGCCACATCAcacgCAGTTGGCCAGCCGACTACGCTGTGATTGGCTACAGCCTGCATCTGGAACCCTTCACAACATTCTGGAACGCTGTGGAATTCTCTTAACTGGACACACAAACTTCTCCCAGATGATGTCATGGAGACTGAACTGTCTGATGCTAACTGATGCTAATGGAGGCTAACTGCTAAGTGCTAGCGTTGTAGCTGATCAACCAGTTTTTCCCAGACTGACTTGAGTACAGAGACCTGAAGCACAACCACTGATCTACAACAGCACACTCAGACACATGCTACATGCTAACACCAGCAGCAGTTGGAATGTAGTAGCTACCTACCTTACTGTCAAATTAGCTAAATGATAAATGCTAACGGATGCTAACTGCTAAATGCTACTGTTCACTCACCATCATAATGCCTTAAtaactctgttttgttttgttttaagtATTTTGCATGAACGAAGACCgtgttagttgttgttgttgttgttaacgtTAGTTAGGCTGTGTTACCTAGCGACAGCCCTGACTACCACAtatagttgttatggttaccGTATGCCTctcctccatgttgttgtgtaATGATAAGAGCTTTGTCTTTATTCTAATGTTCACCTGATCATCATGTACATCATTATGCTGCGTTCATTACTCTGAGAGCAATAAGGATGCATGATCGCTTTAGTTATTATTGGATGTTATTATTACCAAGGATATTCTGACATTGTGTTTTAGAGCTTTGCATCATACTCTGCCTTAAGatgagagtgagagggatagcacacatgtagtgtttacgtgtgtgtgtgtgcatgtgtgtgtgagttgtttTAGTTAAACTTGAAGCACAGTCCTATACCAGCGAATATTACTACACATTGACCcgccctctccctctttttctcaccTGATTGGACCTTTACTCCTAAGAACAACCAATGAATGAGACAAAGTTATCTGCTGCTTCCTGTTTATGCCCAGCCTCTTGTCCTGTGGCATTTTTAGGCCTATTTCTTACACCAATCAAATGCTTTGGATAGATGtgtagaggagaagggag

Function

NR:

description
LIM and calponin homology domains-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971950.1 False 3897 mRNA 0.53 24 555508 647721
XM_036971951.1 False 3827 mRNA 0.53 23 555509 647721
XM_036971949.1 False 3898 mRNA 0.53 24 555510 647721
XM_036971952.1 False 3351 mRNA 0.53 22 570819 647721
TU2667660 False 588 TUCP 0.55 3 555514 571077
TU2667653 False 2661 TUCP 0.53 7 577942 584459
TU2667672 False 620 lncRNA 0.54 3 610466 611281
TU2667638 True 1588 lncRNA 0.46 7 637476 648529

Neighbor

gene id symbol gene type direction distance location
LOC118947011 uchl1 coding upstream 2093 542490 ~ 553415 (+)
LOC110515074 NA coding upstream 85967 415509 ~ 469541 (+)
LOC110519477 LOC105007586 coding upstream 144975 377666 ~ 410533 (+)
LOC118946999 med28 coding upstream 239721 315236 ~ 320283 (+)
LOC118947009 NA coding upstream 507717 45040 ~ 47791 (+)
LOC118947015 tmem192 coding downstream 1989 649710 ~ 692129 (+)
LOC118947016 LOC106591887 coding downstream 82283 730004 ~ 745550 (+)
LOC118947001 naf1 coding downstream 109930 757651 ~ 775355 (+)
LOC110514760 pmm2 coding downstream 127885 775606 ~ 782226 (+)
LOC118947012 LOC105009536 coding downstream 406360 1054081 ~ 1100594 (+)
G2332232 NA non-coding upstream 413 554823 ~ 555095 (+)
G2332171 NA non-coding upstream 53328 474417 ~ 502180 (+)
G2332080 NA non-coding upstream 56994 466423 ~ 498514 (+)
G2332216 NA non-coding upstream 57619 497178 ~ 497889 (+)
G2332214 NA non-coding upstream 75457 479315 ~ 480051 (+)
G2332251 NA non-coding downstream 41729 689450 ~ 691473 (+)
G2332253 NA non-coding downstream 48546 696267 ~ 696661 (+)
G2332263 NA non-coding downstream 73842 721563 ~ 722426 (+)
G2332265 NA non-coding downstream 77274 724995 ~ 726392 (+)
G2332067 NA other upstream 324660 228794 ~ 230848 (+)
G2332063 NA other upstream 329260 211123 ~ 226248 (+)
G2332039 NA other upstream 411210 142694 ~ 144298 (+)
LOC110516484 spock3 other upstream 514190 21703 ~ 44948 (+)
G2332406 NA other downstream 545300 1193021 ~ 1193350 (+)
G2332408 NA other downstream 549695 1197416 ~ 1198795 (+)
G2332472 NA other downstream 731151 1378872 ~ 1379331 (+)
G2332498 NA other downstream 776835 1424556 ~ 1426452 (+)
LOC118947003 clrn2 other downstream 951571 1598798 ~ 1617849 (+)
LOC110510700 NA coding upstream 41060 563509 ~ 569406 (+)
G2332243 NA non-coding upstream 376 609572 ~ 610090 (+)
G2332242 NA non-coding upstream 12009 598206 ~ 598457 (+)
LOC110517278 LOC106596232 other upstream 26007 555508 ~ 648529 (+)

Expression


Co-expression Network