LOC118947015 (tmem192)


Basic Information

Item Value
gene id LOC118947015
gene name tmem192
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 649710 ~ 692129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972028.1
GAGCAGTGGGCTGCCCGACCGGACCAATAACAGAGAAACACCGCTGTCACATGGAAGCAGAGTATGAGGCTATCCGCTAAAACAGACGCTTTTTAAATGAAAAATTCTGTGTGTATTTAGCTTTATAAATCTTTCTCTTGAAGAGTTAACCTGTGCGACTTCAACACACCATGGAATCGGAAGGGATGTCGCACCATGCAgtcaGTTCATCAGTAGATGTGTCTCAGAGTGTTGAGGAGGACCCTTTAGTGGACGGACCGCTGATCTCCCATGATGCCTTGCAGTCTGCTATCAGGAGAGAATTCACAACTCTCCCCACGcactgtcctgctgtcctgctgctgctgctacagGTGGTGTAtgtgtctctgagtgtgtgtgttgccgtagtgtgtgtgtttgaggttgGCCGGGAGGAGTGCGTCCGTGTGTTGGGGAATGTTCGGGGGCAGAGTGTGGTGGTGATTGGGAAGGtgtttgtgtggctgtgtgtgttgttgtttggtgtgtgtgttcagcatcACCACAGCCGAGTGAGGAGCAGAGGATACCTCCGTTTCTACAGAGACAACCGCACCCTGAAACACCTGCCCTTCCTCATCCACTCTGCAGggaacaCGGCGGTGTTGGTGGTCATGTCAGCTGATCTGCCAGAGGCGGATCATCTTCCTGTTTATCTGCTGCTAGGGATTCTGGGACTGGAGCTCCTGGTCTCTCTGCCTTGTCTGATCATCTACACAGTCAGGGTGGTGAGATTCAACAGAGACCGAGCTGGTCCAGATATCAGTCAGGAGGAACCATCGAACTCCTACAACACTACTGAGACTGGcttcagGGAGGGCTCCAGTCTGGAGGAGGTAGTGGAGAAACAAGCTGATCTCATCGACTACCTGAAGCAACACAACACCTTACTGAGCAAGAGACTGCTCAACATGACTGTACAGCACtgaccacaatacaaccacaacaccaccataagagacagagagaggaggatggaagaaGAGAAGAGTGTCACAGATTAGAGGCCTCGTTTTATTTCTCTGTGACCACCCCAAGTGACCTCTGGGTAGTGTGTGTGCGTAgagattgtgtgtctgtgtagagaTTGTGCGTGAAAAGGGTAGTCATTAGAGATATGTGAtaaagagggagaagaagggaggagaggggagggagggagggagggaggg

Function

symbol description
tmem192 Predicted to be located in endosome; lysosome; and membrane. Predicted to be integral component of membrane. Predicted to be active in late endosome and lysosomal membrane. Orthologous to human TMEM192 (transmembrane protein 192).

NR:

description
PREDICTED: transmembrane protein 192

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972028.1 True 1193 mRNA 0.51 6 649710 692129

Neighbor

gene id symbol gene type direction distance location
LOC110517278 LOC106596232 coding upstream 1989 555508 ~ 648529 (+)
LOC110510700 NA coding upstream 80304 563509 ~ 569406 (+)
LOC118947011 uchl1 coding upstream 96295 542490 ~ 553415 (+)
LOC110515074 NA coding upstream 180169 415509 ~ 469541 (+)
LOC110519477 LOC105007586 coding upstream 239177 377666 ~ 410533 (+)
LOC118947016 LOC106591887 coding downstream 37875 730004 ~ 745550 (+)
LOC118947001 naf1 coding downstream 65522 757651 ~ 775355 (+)
LOC110514760 pmm2 coding downstream 83477 775606 ~ 782226 (+)
LOC118947012 LOC105009536 coding downstream 361952 1054081 ~ 1100594 (+)
LOC110515175 LOC105007598 coding downstream 429689 1121818 ~ 1185821 (+)
G2332243 NA non-coding upstream 39620 609572 ~ 610090 (+)
G2332242 NA non-coding upstream 51253 598206 ~ 598457 (+)
G2332232 NA non-coding upstream 94615 554823 ~ 555095 (+)
G2332253 NA non-coding downstream 4138 696267 ~ 696661 (+)
G2332263 NA non-coding downstream 29434 721563 ~ 722426 (+)
G2332265 NA non-coding downstream 32866 724995 ~ 726392 (+)
G2332181 NA non-coding downstream 93569 785698 ~ 787279 (+)
LOC118946999 med28 other upstream 333373 315236 ~ 320283 (+)
G2332067 NA other upstream 418862 228794 ~ 230848 (+)
G2332063 NA other upstream 423462 211123 ~ 226248 (+)
G2332039 NA other upstream 505412 142694 ~ 144298 (+)
G2332406 NA other downstream 500892 1193021 ~ 1193350 (+)
G2332408 NA other downstream 505287 1197416 ~ 1198795 (+)
G2332472 NA other downstream 686743 1378872 ~ 1379331 (+)
G2332498 NA other downstream 732427 1424556 ~ 1426452 (+)
LOC118947003 clrn2 other downstream 907163 1598798 ~ 1617849 (+)

Expression


Co-expression Network