spock3


Basic Information

Item Value
gene id spock3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 1954337 ~ 1990528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972014.1
AGCGGCGCGCATCCGTGAAACGGCGttcagcggagagagagagagagagagagagcgcatttATTCCGCATacgacagagagcagacagacagagcggcTAGCTATGCGACAGCAGCAACGACAGACTAACGACAAGATGTTGAGTTtcgctgtgctgtgtgtgtgtgccatcgcCGGTGAAGTGTCCGCGCGCTCTACCAGCTGGAATTTCCTGGATGACAAGTCGTTAACAGCACGATGGGACAAATTTCGGGATGAAGTGGAGGAGCCAGGTACATGGAATCCTGGGAAAGCGTTTGATCAAGgtctgaaCCCAGATAACCCCTGTCTGAAGGTCAAGTGTAGCGGTCACAAAGTGTGTGTTGCAGACGACGACCAGACTGCTGCTTGTGTTAGCCAGCGGAGGGTCAGtgtgAAGGAACCGGGCCTGTCTCTGAGTCCAGGGTCCAAATGCAGACGCTGTCCAGTGGTCCGTCCCTCTCCTGTGTGTGGTACTGACGGACACAGCTACTCAACCAAGtgTAAGTTGGAGTATCAGGCATGTATCTCAGGGAAGCAGATCTCAGTCCAGTGTTCTGGCCAGTGTCCCTGTCCTGCTGTCCTTCCTGAATACAGCACAGcaggacagacagagtgcagtgaGTCAGACATAAAGGAGGTTGTGGGTCGGTTAAGGGACTGGTTCAGAGTTCTACTTGAGAACGGAAACAACAAGAAACTGAAGACACACATACCTCAGAAAAACAAGTTCAGCTCGGGGGCGGGGCCTATCTGTAAGGATCCTCTTGGTTGGATGTTCTCCCGCCTCGACACAAACTTTGACCTCCAGCTGGACCAATCAGAGCTCAGCAGGCTGGGGCTGGACAGGAAGGAAGGCTGCTCCGATGCACTCTTCACTTCCTGTGACACACCCACTGACACACACCCCGACACACACCCCgacacactcctcctctccagcgcagagTGGTGCACCTGCTTCCAGAGATACACAGactCCCCCTGTTGGTCTGAACTGACCAGTATTAACAAGAAACAGGCTACGGAGAAGCTACCGGGTCAGTACCTGCCAGTGTGTGACGCAGAGGGCTACTACCGGTCCCACCAGTGCCACGGCAGCAGCGGACAGTGCTGGTGTGTCGATCGCTATGGCAACGAGGTCGCAGGGTCACGGACCCACGGAGCAGCAGACTGTGGGGTGGTGTTGGAATCATCTGGAGACCAGGGCAGCGGAGACTCTCTCTTCTCCGACGACGACTATgacgatgatgaagatgatgcCTTCGTCCTGAGCGACCAGATCGATGACGAAGATGACGAAGACGAGGACGATTATGACGGAGAGGAAAGATATCTGTCGTAACTCCGTCACTCTGCACTTTGCCAGGGGACTTCAGCAGCAAGAATAGTTGCTAGGCGACCTCGTCACCGCTAACAGACTAaagacatttctctctctctcttctgtgtctCAAATGTCCCCCTATACCCTAGTCAGTTCCCCAGGGCCCATTGGGTGCTGGGGGAAGGCAGTTCACTACATAGTGTACAGGGCACCATTTGGGATGGCCCactctgtgtttgttgtctgttccTAACTTAAGGTGGACTCTGCAATTTGACACCATTGTacaaattgggggggggggggggacgacttCCT
>XM_036972015.1
AGCGGCGCGCATCCGTGAAACGGCGttcagcggagagagagagagagagagagagcgcatttATTCCGCATacgacagagagcagacagacagagcggcTAGCTATGCGACAGCAGCAACGACAGACTAACGACAAGATGTTGAGTTtcgctgtgctgtgtgtgtgtgccatcgcCGGTGAAGTGTCCGCGCGCTCTACCAGCTGGAATTTCCTGGATGACAAGTCGTTAACAGCACGATGGGACAAATTTCGGGATGAGCCAGGTACATGGAATCCTGGGAAAGCGTTTGATCAAGgtctgaaCCCAGATAACCCCTGTCTGAAGGTCAAGTGTAGCGGTCACAAAGTGTGTGTTGCAGACGACGACCAGACTGCTGCTTGTGTTAGCCAGCGGAGGGTCAGtgtgAAGGAACCGGGCCTGTCTCTGAGTCCAGGGTCCAAATGCAGACGCTGTCCAGTGGTCCGTCCCTCTCCTGTGTGTGGTACTGACGGACACAGCTACTCAACCAAGtgTAAGTTGGAGTATCAGGCATGTATCTCAGGGAAGCAGATCTCAGTCCAGTGTTCTGGCCAGTGTCCCTGTCCTGCTGTCCTTCCTGAATACAGCACAGcaggacagacagagtgcagtgaGTCAGACATAAAGGAGGTTGTGGGTCGGTTAAGGGACTGGTTCAGAGTTCTACTTGAGAACGGAAACAACAAGAAACTGAAGACACACATACCTCAGAAAAACAAGTTCAGCTCGGGGGCGGGGCCTATCTGTAAGGATCCTCTTGGTTGGATGTTCTCCCGCCTCGACACAAACTTTGACCTCCAGCTGGACCAATCAGAGCTCAGCAGGCTGGGGCTGGACAGGAAGGAAGGCTGCTCCGATGCACTCTTCACTTCCTGTGACACACCCACTGACACACACCCCGACACACACCCCgacacactcctcctctccagcgcagagTGGTGCACCTGCTTCCAGAGATACACAGactCCCCCTGTTGGTCTGAACTGACCAGTATTAACAAGAAACAGGCTACGGAGAAGCTACCGGGTCAGTACCTGCCAGTGTGTGACGCAGAGGGCTACTACCGGTCCCACCAGTGCCACGGCAGCAGCGGACAGTGCTGGTGTGTCGATCGCTATGGCAACGAGGTCGCAGGGTCACGGACCCACGGAGCAGCAGACTGTGGGGTGGTGTTGGAATCATCTGGAGACCAGGGCAGCGGAGACTCTCTCTTCTCCGACGACGACTATgacgatgatgaagatgatgcCTTCGTCCTGAGCGACCAGATCGATGACGAAGATGACGAAGACGAGGACGATTATGACGGAGAGGAAAGATATCTGTCGTAACTCCGTCACTCTGCACTTTGCCAGGGGACTTCAGCAGCAAGAATAGTTGCTAGGCGACCTCGTCACCGCTAACAGACTAaagacatttctctctctctcttctgtgtctCAAATGTCCCCCTATACCCTAGTCAGTTCCCCAGGGCCCATTGGGTGCTGGGGGAAGGCAGTTCACTACATAGTGTACAGGGCACCATTTGGGATGGCCCactctgtgtttgttgtctgttccTAACTTAAGGTGGACTCTGCAATTTGACACCATTGTacaaattgggggggggggggggacgacttCCT
>XM_036972016.1
AGCGGCGCGCATCCGTGAAACGGCGttcagcggagagagagagagagagagagagcgcatttATTCCGCATacgacagagagcagacagacagagcggcTAGCTATGCGACAGCAGCAACGACAGACTAACGACAAGATGTTGAGTTtcgctgtgctgtgtgtgtgtgccatcgcCGGTGAAGTGTCCGCGCGCTCTACCAGCTGGAATTTCCTGGATGACAAGTCGTTAACAGCACGATGGGACAAATTTCGGGATGAAGTGGAGGAGCCAGGTACATGGAATCCTGGGAAAGCGTTTGATCAAGgtctgaaCCCAGATAACCCCTGTCTGAAGGTCAAGTGTAGCGGTCACAAAGTGTGTGTTGCAGACGACGACCAGACTGCTGCTTGTGTTAGCCAGCGGAGGGTCAGtgtgAAGGAACCGGGCCTGTCTCTGAGTCCAGGGTCCAAATGCAGACGCTGTCCAGTGGTCCGTCCCTCTCCTGTGTGTGGTACTGACGGACACAGCTACTCAACCAAGtgTAAGTTGGAGTATCAGGCATGTATCTCAGGGAAGCAGATCTCAGTCCAGTGTTCTGGCCAGTGTCCCTGTCCTGCTGTCCTTCCTGAATACAGCACAGcaggacagacagAGTTCAGCTCGGGGGCGGGGCCTATCTGTAAGGATCCTCTTGGTTGGATGTTCTCCCGCCTCGACACAAACTTTGACCTCCAGCTGGACCAATCAGAGCTCAGCAGGCTGGGGCTGGACAGGAAGGAAGGCTGCTCCGATGCACTCTTCACTTCCTGTGACACACCCACTGACACACACCCCGACACACACCCCgacacactcctcctctccagcgcagagTGGTGCACCTGCTTCCAGAGATACACAGactCCCCCTGTTGGTCTGAACTGACCAGTATTAACAAGAAACAGGCTACGGAGAAGCTACCGGGTCAGTACCTGCCAGTGTGTGACGCAGAGGGCTACTACCGGTCCCACCAGTGCCACGGCAGCAGCGGACAGTGCTGGTGTGTCGATCGCTATGGCAACGAGGTCGCAGGGTCACGGACCCACGGAGCAGCAGACTGTGGGGTGGTGTTGGAATCATCTGGAGACCAGGGCAGCGGAGACTCTCTCTTCTCCGACGACGACTATgacgatgatgaagatgatgcCTTCGTCCTGAGCGACCAGATCGATGACGAAGATGACGAAGACGAGGACGATTATGACGGAGAGGAAAGATATCTGTCGTAACTCCGTCACTCTGCACTTTGCCAGGGGACTTCAGCAGCAAGAATAGTTGCTAGGCGACCTCGTCACCGCTAACAGACTAaagacatttctctctctctcttctgtgtctCAAATGTCCCCCTATACCCTAGTCAGTTCCCCAGGGCCCATTGGGTGCTGGGGGAAGGCAGTTCACTACATAGTGTACAGGGCACCATTTGGGATGGCCCactctgtgtttgttgtctgttccTAACTTAAGGTGGACTCTGCAATTTGACACCATTGTacaaattgggggggggggggggacgacttCCT

Function

NR:

description
PREDICTED: testican-3

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972014.1 False 1664 mRNA 0.54 12 1954337 1990528
XM_036972015.1 False 1655 mRNA 0.54 11 1954337 1990528
XM_036972016.1 True 1550 mRNA 0.55 11 1954337 1990528

Neighbor

gene id symbol gene type direction distance location
LOC118947002 LOC105007586 coding downstream 368250 1562205 ~ 1586087 (-)
LOC110515474 NA coding downstream 396781 1498585 ~ 1557714 (-)
uchl1 uchl1 coding downstream 531606 1412122 ~ 1422731 (-)
LOC110514204 LOC106595830 coding downstream 544447 1347450 ~ 1409890 (-)
LOC118946997 NA coding downstream 556936 1395842 ~ 1397401 (-)
LOC110512130 LOC105009093 coding upstream 74175 2064703 ~ 2265397 (-)
LOC118946996 NA coding upstream 404367 2394895 ~ 2399378 (-)
LOC110515946 NA coding upstream 511360 2500287 ~ 2583692 (-)
LOC118947017 LOC106570794 coding upstream 515845 2506373 ~ 2585527 (-)
LOC118947018 NA coding upstream 522824 2513352 ~ 2515174 (-)
G2333494 NA non-coding downstream 35723 1917227 ~ 1918614 (-)
G2333489 NA non-coding downstream 50292 1903794 ~ 1904045 (-)
G2333481 NA non-coding downstream 69280 1883196 ~ 1885057 (-)
G2333479 NA non-coding downstream 77307 1876153 ~ 1877030 (-)
G2333474 NA non-coding downstream 86189 1867280 ~ 1868148 (-)
G2333524 NA non-coding upstream 3510 1994038 ~ 1994336 (-)
G2333525 NA non-coding upstream 8766 1999294 ~ 1999530 (-)
G2333526 NA non-coding upstream 57080 2047608 ~ 2047811 (-)
G2333527 NA non-coding upstream 66512 2057040 ~ 2057251 (-)
G2333529 NA non-coding upstream 77371 2067899 ~ 2068585 (-)
G2333429 NA other downstream 212340 1741009 ~ 1741997 (-)
G2333385 NA other downstream 282364 1667991 ~ 1729093 (-)
G2332980 NA other downstream 750809 1202114 ~ 1203528 (-)
G2332976 NA other downstream 760993 1193004 ~ 1193344 (-)
G2333553 NA other upstream 147438 2137966 ~ 2145017 (-)
G2333706 NA other upstream 616571 2607099 ~ 2607590 (-)

Expression


Co-expression Network