LOC118946996


Basic Information

Item Value
gene id LOC118946996
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 2394895 ~ 2399378 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971944.1
ATGCGCTCTCTTGATTCTGAACCTGTCTACTTAGTGTGGGATAGGATCGACCGGGAccggGTCGTGTTGGAGGTGGTGTTGAAGATTGTGTTGAAGGTCGTGTTGAAGATTGTGTTGAAGGTCGTGTTGAAGATTGTGCTGAAGGTCGTGTTGAAGATTGTGTTGAAGGTCGTGTTGAAGGTCGTGTTGAAGATTGTGTTGAAGGTGGTGTTGGACGTTTATACGCGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCCCAGACGAGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGAGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCTCATACGAGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGAGTTCTGACTCTCAGACGCGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGCGTTCTGACTCCCAGACGCGTTCTGACTCTCAGACGCGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCCCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCCCAGACGAGTTCTGACTCTCAGACGGGTTCTGACTCTCAGACGGGTTCTGACTCAGACGGGTTCTGA

Function

NR:

description
Low-density lipoprotein receptor-related protein 12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971944.1 True 1203 mRNA 0.54 3 2394895 2399378

Neighbor

gene id symbol gene type direction distance location
LOC110512130 LOC105009093 coding downstream 129498 2064703 ~ 2265397 (-)
spock3 NA coding downstream 404367 1954337 ~ 1990528 (-)
LOC118947002 LOC105007586 coding downstream 808808 1562205 ~ 1586087 (-)
LOC110515474 NA coding downstream 837339 1498585 ~ 1557714 (-)
uchl1 uchl1 coding downstream 972164 1412122 ~ 1422731 (-)
LOC110515946 NA coding upstream 102510 2500287 ~ 2583692 (-)
LOC118947017 LOC106570794 coding upstream 106995 2506373 ~ 2585527 (-)
LOC118947018 NA coding upstream 113974 2513352 ~ 2515174 (-)
LOC118947010 NA coding upstream 299461 2698839 ~ 2741820 (-)
G2333605 NA non-coding downstream 14225 2380096 ~ 2380670 (-)
G2333592 NA non-coding downstream 31327 2327282 ~ 2363568 (-)
G2333598 NA non-coding downstream 32989 2358933 ~ 2361906 (-)
G2333594 NA non-coding downstream 46419 2343428 ~ 2348476 (-)
G2333582 NA non-coding downstream 124679 2269973 ~ 2270216 (-)
G2333615 NA non-coding upstream 6390 2405768 ~ 2407039 (-)
G2333625 NA non-coding upstream 39625 2439003 ~ 2439569 (-)
G2333517 LOC106596818 non-coding upstream 49873 2449251 ~ 2450468 (-)
G2333520 NA non-coding upstream 52467 2451845 ~ 2453610 (-)
G2333638 NA non-coding upstream 66752 2466130 ~ 2468825 (-)
G2333553 NA other downstream 249878 2137966 ~ 2145017 (-)
G2333429 NA other downstream 652898 1741009 ~ 1741997 (-)
G2333385 NA other downstream 722922 1667991 ~ 1729093 (-)
G2332980 NA other downstream 1191367 1202114 ~ 1203528 (-)
G2333706 NA other upstream 207721 2607099 ~ 2607590 (-)

Expression


Co-expression Network