LOC118947018


Basic Information

Item Value
gene id LOC118947018
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 2513352 ~ 2515174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041637.1
tgtctacattgatgctaattagcatgttcaaatctgagagtaaatagagccgaatatattgataaaagtctaCCTTGTCGTAGAGAGATTTACAGGGTCATCAAAACACCACGGCAGGTTAAACCTACACAAAACACCACTGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACCAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGGTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAAGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACCAAACACCACGGCAGGTTAAACTACACAAAACACCATGGTAGGGTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAAGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGGTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAAGTTAAACCTACACAAAACACCACGGCAAGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACCTACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGTTAAACACAAAACACCACGGCAGGttaaacacaaaacacagcc

Function

NR:

description
PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041637.1 True 1747 mRNA 0.45 2 2513352 2515174

Neighbor

gene id symbol gene type direction distance location
LOC110515946 NA coding downstream 9214 2500287 ~ 2583692 (-)
LOC118946996 NA coding downstream 113974 2394895 ~ 2399378 (-)
LOC110512130 LOC105009093 coding downstream 247955 2064703 ~ 2265397 (-)
spock3 NA coding downstream 522824 1954337 ~ 1990528 (-)
LOC118947002 LOC105007586 coding downstream 927265 1562205 ~ 1586087 (-)
LOC118947010 NA coding upstream 183665 2698839 ~ 2741820 (-)
G2333638 NA non-coding downstream 44527 2466130 ~ 2468825 (-)
G2333520 NA non-coding downstream 59742 2451845 ~ 2453610 (-)
G2333517 LOC106596818 non-coding downstream 62884 2449251 ~ 2450468 (-)
G2333625 NA non-coding downstream 73783 2439003 ~ 2439569 (-)
G2333615 NA non-coding downstream 106313 2405768 ~ 2407039 (-)
G2333650 NA non-coding upstream 18038 2533212 ~ 2534533 (-)
G2333651 NA non-coding upstream 20551 2535725 ~ 2536686 (-)
G2333652 NA non-coding upstream 23771 2538945 ~ 2539356 (-)
G2333658 NA non-coding upstream 51836 2567010 ~ 2567912 (-)
G2333703 NA non-coding upstream 85191 2600365 ~ 2600740 (-)
G2333553 NA other downstream 368335 2137966 ~ 2145017 (-)
G2333429 NA other downstream 771355 1741009 ~ 1741997 (-)
G2333385 NA other downstream 841379 1667991 ~ 1729093 (-)
LOC110515474 NA other downstream 955638 1498585 ~ 1557714 (-)
G2332980 NA other downstream 1309824 1202114 ~ 1203528 (-)
G2333706 NA other upstream 91925 2607099 ~ 2607590 (-)

Expression


Co-expression Network