LOC118947010


Basic Information

Item Value
gene id LOC118947010
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 2698839 ~ 2741820 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972005.1
tgtgtagaagcagCTGTGGGGTGATGTTGGAGCTGTGAGTGGGGGAAAGATTGATAGTGAGGTTTGGAAGGACCTGCAGGCGGCCACGGTGAACCCTGACCCCAGCTTGAAGGAGTTTGAGGGAGCTACGCTCAGATATGCATCGctacgGATCCCTCTCCCACTGGAAGAGGAGGAGTCTAACAGTGACCCTGAGGCCAAGtgttttgcggTGCAGTCTCTGGGTTGGGTAGAGATGGCAGAAGAGGACCTGTCGCCAGGGAAGAGTAGTGTTGCCGTTAACAACTGTATCCGACAGCTATCCTACTGCAAGAGCAACATCAGAGACACGGTCGGCATctggggagagggtCAGGACATGTATCTGGTTCTGGTGAACAACATGTTGAACCTGGTTGATCCTACGGACCGTTGTCTTGGCAACGTGCTTCATTCTCAGCCAATAGCAAGCATTCGTGTCTGGGGGGTCGGCCGTGACAATGTCAGAGAGAGGGACTTTGCGTACGTAGCGAGGGATAAGGACACCAGGATTCTGAAGTGTCATGTGTTCCGTTGTGACACTCCAGCTAAAGCCATCGCTACCAGCCTCCACCTCATCTGCTCTAGGATCATGTCAGAGCGTAAGCATGCTAAAGCGTTATCAGGGGCGTTGTCAGGGGGCGTGTCTCTACACGACAGAATGCAGTCAGGACTAGACCTCCCACTACaagcagaGTTCCCCACTCCAAAGACAGAGTTGGTCCAGAGATTCCGGCTGCTGTATCTGGGAATGAAGCCAGTAGACAGACCTAtagGTATGGACATATTGAACGGGGCGATAGACAGTCTGATTGGTTCTTCCAGTAGAGAGGAGTGGAAAGCTGTTAACCTCAACGTGGCTGATGCTACCCTCATTATCAGCAACAACCAGgaggaggaggagaaggtgaaggaggatgaggaggtgaaggaggaggtggaggaggaggtggaggaggaggaggaggtgttggtAGAGTGCAGGGTGAGGTTTCTGTCCTTCATGGGGGTAGGGAGGGACATCCACTGCTTTGCCTTCATCATGGACGGAGGAGGACAACGCTACGAGTGTCACGTGTTCTGGTGTGAACCCAACGCTGGACAGCTCTCTGAGGCCGTACAGGCTGCGTGCATGttAAGGTATCAGAAGTGCCTGTTGGCTCACCCCCCCTCCCAGAGATCCCTCCCCTCCTGTGGCCGTGGCTCCTCCTCCCTGGGCAGCGGCGGTGGTAACCGCGGTAACGGCGGTGTGAAGAGAGGAGTGCTGTCCCTCATCGACACCCTCAAACAGAAGGGACCGCTGCCCCACCAGAGTAACTACGGAAACTAAACTAACATCGTGACTACGACCGCACACCCCGGTAACTATGGGGTAAAAAACAACGCTGCACCTTGCTAACCGTGGAAATCACTACTCTAATCCGGTCGAACTATGGCAGCCAAACGTAGACCTCCTCCCATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTGCCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTGCCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACA
>XM_036972006.1
tgtgtagaagcagCTGTGGGGTGATGTTGGAGCTGTGAGTGGGGGAAAGATTGATAGTGAGGTTTGGAAGGACCTGCAGGCGGCCACGGTGAACCCTGACCCCAGCTTGAAGGAGTTTGAGGGAGCTACGCTCAGATATGCATCGctacgGATCCCTCTCCCACTGGAAGAGGAGGAGTCTAACAGTGACCCTGAGGCCAAGtgttttgcggTGCAGTCTCTGGGTTGGGTAGAGATGGCAGAAGAGGACCTGTCGCCAGGGAAGAGTAGTGTTGCCGTTAACAACTGTATCCGACAGCTATCCTACTGCAAGAGCAACATCAGAGACACGGTCGGCATctggggagagggtCAGGACATGTATCTGGTTCTGGTGAACAACATGTTGAACCTGGTTGATCCTACGGACCGTTGTCTTGGCAACGTGCTTCATTCTCAGCCAATAGCAAGCATTCGTGTCTGGGGGGTCGGCCGTGACAATGTCAGAGAGAGGGACTTTGCGTACGTAGCGAGGGATAAGGACACCAGGATTCTGAAGTGTCATGTGTTCCGTTGTGACACTCCAGCTAAAGCCATCGCTACCAGCCTCCACCTCATCTGCTCTAGGATCATGTCAGAGCGTAAGCATGCTAAAGCGTTATCAGGGGCGTTGTCAGGGGGCGTGTCTCTACACGACAGAATGCAGTCAGGACTAGACCTCCCACTACaagaGTTCCCCACTCCAAAGACAGAGTTGGTCCAGAGATTCCGGCTGCTGTATCTGGGAATGAAGCCAGTAGACAGACCTAtagGTATGGACATATTGAACGGGGCGATAGACAGTCTGATTGGTTCTTCCAGTAGAGAGGAGTGGAAAGCTGTTAACCTCAACGTGGCTGATGCTACCCTCATTATCAGCAACAACCAGgaggaggaggagaaggtgaaggaggatgaggaggtgaaggaggaggtggaggaggaggtggaggaggaggaggaggtgttggtAGAGTGCAGGGTGAGGTTTCTGTCCTTCATGGGGGTAGGGAGGGACATCCACTGCTTTGCCTTCATCATGGACGGAGGAGGACAACGCTACGAGTGTCACGTGTTCTGGTGTGAACCCAACGCTGGACAGCTCTCTGAGGCCGTACAGGCTGCGTGCATGttAAGGTATCAGAAGTGCCTGTTGGCTCACCCCCCCTCCCAGAGATCCCTCCCCTCCTGTGGCCGTGGCTCCTCCTCCCTGGGCAGCGGCGGTGGTAACCGCGGTAACGGCGGTGTGAAGAGAGGAGTGCTGTCCCTCATCGACACCCTCAAACAGAAGGGACCGCTGCCCCACCAGAGTAACTACGGAAACTAAACTAACATCGTGACTACGACCGCACACCCCGGTAACTATGGGGTAAAAAACAACGCTGCACCTTGCTAACCGTGGAAATCACTACTCTAATCCGGTCGAACTATGGCAGCCAAACGTAGACCTCCTCCCATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTGCCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTGCCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACA
>XM_036972007.1
tgtgtagaagcagCTGTGGGGTGATGTTGGAGCTGTGAGTGGGGGAAAGATTGATAGTGAGGTTTGGAAGGACCTGCAGGCGGCCACGGTGAACCCTGACCCCAGCTTGAAGGAGTTTGAGGGAGCTACGCTCAGATATGCATCGctacgGATCCCTCTCCCACTGGAAGAGGAGGAGTCTAACAGTGACCCTGAGGCCAAGtgttttgcggTGCAGTCTCTGGGTTGGGTAGAGATGGCAGAAGAGGACCTGTCGCCAGGGAAGAGTAGTGTTGCCGTTAACAACTGTATCCGACAGCTATCCTACTGCAAGAGCAACATCAGAGACACGGTCGGCATctggggagagggtCAGGACATGTATCTGGTTCTGGTGAACAACATGTTGAACCTGGTTGATCCTACGGACCGTTGTCTTGGCAACGTGCTTCATTCTCAGCCAATAGCAAGCATTCGTGTCTGGGGGGTCGGCCGTGACAATGTCAGGGACTTTGCGTACGTAGCGAGGGATAAGGACACCAGGATTCTGAAGTGTCATGTGTTCCGTTGTGACACTCCAGCTAAAGCCATCGCTACCAGCCTCCACCTCATCTGCTCTAGGATCATGTCAGAGCGTAAGCATGCTAAAGCGTTATCAGGGGCGTTGTCAGGGGGCGTGTCTCTACACGACAGAATGCAGTCAGGACTAGACCTCCCACTACaagcagaGTTCCCCACTCCAAAGACAGAGTTGGTCCAGAGATTCCGGCTGCTGTATCTGGGAATGAAGCCAGTAGACAGACCTAtagGTATGGACATATTGAACGGGGCGATAGACAGTCTGATTGGTTCTTCCAGTAGAGAGGAGTGGAAAGCTGTTAACCTCAACGTGGCTGATGCTACCCTCATTATCAGCAACAACCAGgaggaggaggagaaggtgaaggaggatgaggaggtgaaggaggaggtggaggaggaggtggaggaggaggaggaggtgttggtAGAGTGCAGGGTGAGGTTTCTGTCCTTCATGGGGGTAGGGAGGGACATCCACTGCTTTGCCTTCATCATGGACGGAGGAGGACAACGCTACGAGTGTCACGTGTTCTGGTGTGAACCCAACGCTGGACAGCTCTCTGAGGCCGTACAGGCTGCGTGCATGttAAGGTATCAGAAGTGCCTGTTGGCTCACCCCCCCTCCCAGAGATCCCTCCCCTCCTGTGGCCGTGGCTCCTCCTCCCTGGGCAGCGGCGGTGGTAACCGCGGTAACGGCGGTGTGAAGAGAGGAGTGCTGTCCCTCATCGACACCCTCAAACAGAAGGGACCGCTGCCCCACCAGAGTAACTACGGAAACTAAACTAACATCGTGACTACGACCGCACACCCCGGTAACTATGGGGTAAAAAACAACGCTGCACCTTGCTAACCGTGGAAATCACTACTCTAATCCGGTCGAACTATGGCAGCCAAACGTAGACCTCCTCCCATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTGCCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCACTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACAGAACTGTCTGCCAGTCGGGGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGTGATCACCTCAACACAGAACTGTCTACCAGTCGGGGATCACCTCAACACA

Function

NR:

description
amyloid beta A4 precursor protein-binding family B member 2-like isoform X3

GO: NA

KEGG:

id description
K04530 APBB2, FE65L; amyloid beta A4 precursor protein-binding family B member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972005.1 False 2205 mRNA 0.54 12 2698839 2741820
XM_036972006.1 False 2202 mRNA 0.53 12 2698839 2741820
XM_036972007.1 True 2199 mRNA 0.54 11 2698839 2741820

Neighbor

gene id symbol gene type direction distance location
LOC118947017 LOC106570794 coding downstream 113312 2506373 ~ 2585527 (-)
LOC118947018 NA coding downstream 183665 2513352 ~ 2515174 (-)
LOC110515946 NA coding downstream 194701 2500287 ~ 2583692 (-)
LOC118946996 NA coding downstream 299461 2394895 ~ 2399378 (-)
LOC110512130 LOC105009093 coding downstream 433442 2064703 ~ 2265397 (-)
G2333699 NA non-coding downstream 594 2697481 ~ 2698245 (-)
G2333698 NA non-coding downstream 2864 2694455 ~ 2695975 (-)
G2333724 NA non-coding downstream 28687 2669826 ~ 2670152 (-)
G2333712 NA non-coding downstream 80605 2617974 ~ 2618234 (-)
G2333711 NA non-coding downstream 80956 2617597 ~ 2617883 (-)
G2333706 NA other downstream 91249 2607099 ~ 2607590 (-)
G2333553 NA other downstream 553822 2137966 ~ 2145017 (-)
G2333429 NA other downstream 956842 1741009 ~ 1741997 (-)
G2333385 NA other downstream 1026866 1667991 ~ 1729093 (-)
LOC110515474 NA other downstream 1141125 1498585 ~ 1557714 (-)

Expression


Co-expression Network