G2332080


Basic Information

Item Value
gene id G2332080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 466423 ~ 498514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2667463
TGTGACATAACCAAAGTTTGACTGAGCAGAGCCGGAACTCAGACACCCTCTGTGGGGATAGAAAAGCATGATACGCAAGTGAGTCTAGCTCAGGACCTAGAAACAGAATGTGCTGATGTGGAGTCAGACAGGTAACTTTTCTGGTTTCTTTGGAAGACTAGAGACTGAATACGGGACAGTAGAATGGATGTGTGTTACATTCCTTGCTCCCTCGACGACTCCGGAGGCGGCTTGTGAGCGTTGTGAGTTTGTAGACTcttgagatgctt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2667463 True 269 lncRNA 0.48 2 466423 498514

Neighbor

gene id symbol gene type direction distance location
LOC110519477 LOC105007586 coding upstream 55890 377666 ~ 410533 (+)
LOC118946999 med28 coding upstream 150636 315236 ~ 320283 (+)
LOC118947009 NA coding upstream 418632 45040 ~ 47791 (+)
LOC110516484 spock3 coding upstream 421475 21703 ~ 44948 (+)
LOC118947011 uchl1 coding downstream 43976 542490 ~ 553415 (+)
LOC110517278 LOC106596232 coding downstream 56994 555508 ~ 648529 (+)
LOC110510700 NA coding downstream 69036 563509 ~ 569406 (+)
LOC118947015 tmem192 coding downstream 151196 649710 ~ 692129 (+)
LOC118947016 LOC106591887 coding downstream 231490 730004 ~ 745550 (+)
G2332157 NA non-coding upstream 7079 458033 ~ 459344 (+)
G2332151 NA non-coding upstream 16514 448389 ~ 449909 (+)
G2332152 NA non-coding upstream 16926 448993 ~ 449497 (+)
G2332149 NA non-coding upstream 23027 443043 ~ 443396 (+)
G2332139 NA non-coding upstream 43698 421704 ~ 422725 (+)
G2332232 NA non-coding downstream 56309 554823 ~ 555095 (+)
G2332242 NA non-coding downstream 99692 598206 ~ 598457 (+)
G2332243 NA non-coding downstream 111058 609572 ~ 610090 (+)
G2332067 NA other upstream 235575 228794 ~ 230848 (+)
G2332063 NA other upstream 240175 211123 ~ 226248 (+)
G2332039 NA other upstream 322125 142694 ~ 144298 (+)
G2332406 NA other downstream 694507 1193021 ~ 1193350 (+)
G2332408 NA other downstream 698902 1197416 ~ 1198795 (+)
G2332472 NA other downstream 880358 1378872 ~ 1379331 (+)
G2332498 NA other downstream 926042 1424556 ~ 1426452 (+)

Expression


Co-expression Network