G2332171


Basic Information

Item Value
gene id G2332171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 474417 ~ 502180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2667633
TGCTGTCAAAATGTTTATTATGTCTTCAGTCTTGTCTTAGAAACAGTAAAACATGAAGTCTTTAGTTGTTCTATAACTGATAGTAAAACATGAAAACAGTCTTTAGTTGTTATATAACTGATAGTAAAACATGACTTCCAGCATTATTATGACTTTAGTGATGTAGATATGAAGCAGAGTAAAGCTTTAAGGATGTTAGCTACAGATACACACAGGATTAAACCTATCATAACCTATCACAGTGCTGCACCGTGGCCAGCAGAGCTCTCCTATTGGGTTACACAGGACTCAGAGAGTGATTGACAGCTAGAGGGGCCATTCAGAGAGGAGGTCTCTCCAGGTATCGCTCCTTCAGGGATCATCGCCACGGTTACGCGTCGTCACCGCCACAGAGCAGGAGGAGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2667633 True 408 lncRNA 0.42 2 474417 502180

Neighbor

gene id symbol gene type direction distance location
LOC110515074 NA coding upstream 4876 415509 ~ 469541 (+)
LOC110519477 LOC105007586 coding upstream 63884 377666 ~ 410533 (+)
LOC118946999 med28 coding upstream 158630 315236 ~ 320283 (+)
LOC118947009 NA coding upstream 426626 45040 ~ 47791 (+)
LOC110516484 spock3 coding upstream 429469 21703 ~ 44948 (+)
LOC118947011 uchl1 coding downstream 40310 542490 ~ 553415 (+)
LOC110517278 LOC106596232 coding downstream 53328 555508 ~ 648529 (+)
LOC110510700 NA coding downstream 65370 563509 ~ 569406 (+)
LOC118947015 tmem192 coding downstream 147530 649710 ~ 692129 (+)
LOC118947016 LOC106591887 coding downstream 227824 730004 ~ 745550 (+)
G2332157 NA non-coding upstream 15073 458033 ~ 459344 (+)
G2332151 NA non-coding upstream 24508 448389 ~ 449909 (+)
G2332152 NA non-coding upstream 24920 448993 ~ 449497 (+)
G2332149 NA non-coding upstream 31021 443043 ~ 443396 (+)
G2332139 NA non-coding upstream 51692 421704 ~ 422725 (+)
G2332232 NA non-coding downstream 52643 554823 ~ 555095 (+)
G2332242 NA non-coding downstream 96026 598206 ~ 598457 (+)
G2332243 NA non-coding downstream 107392 609572 ~ 610090 (+)
G2332067 NA other upstream 243569 228794 ~ 230848 (+)
G2332063 NA other upstream 248169 211123 ~ 226248 (+)
G2332039 NA other upstream 330119 142694 ~ 144298 (+)
G2332406 NA other downstream 690841 1193021 ~ 1193350 (+)
G2332408 NA other downstream 695236 1197416 ~ 1198795 (+)
G2332472 NA other downstream 876692 1378872 ~ 1379331 (+)
G2332498 NA other downstream 922376 1424556 ~ 1426452 (+)

Expression


Co-expression Network