G2333615



Basic Information


Item Value
gene id G2333615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 2405768 ~ 2407039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2669679
GAGTTACTAcccccctaatcctaacccccacacattttctactagTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTTCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTAGTCCAGTGTGAATAGTACTAGTCCAGTGTGAATAGTACTAGACTAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTATTCCAGTCTGAATAGTACTAGTCCAGTCTGAAT
>TU2669680
GAATAGTACTAGTCCAGTGTGAATAGGACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCTAGTCTGAATAGTACTAGTCCAGTCTGAATACTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGCACTAGTCCAGTCTGAATAGTACTAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTATTCCAGTCTGAATAGTACTAGTCCAGTCTGAAT
>TU2669681
GGACTAGTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATACTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGCACTAGTCCAGTCTGAATAGTACTAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTGAATAGTACTATTCCAGTCTGAATAGTACTAGTCCAGTCTGAAT
>TU2669677
GAATAGTACTAGTCCAGTGTGAATAGGACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCTAGTCTGAATAGTACTAGTCCAGTCTGAATACTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGCACTAGTCCAGTCTGAATAGTACTAGTCCAGTCTGAATAGGACTAGTCCAGTGTGAATAGTACTAGTCCAGTCTGAATAGTACTAGTCCAGTGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2669679 False 497 lncRNA 0.40 2 2405768 2407039
TU2669680 False 339 lncRNA 0.40 3 2405768 2406366
TU2669681 False 294 lncRNA 0.40 3 2405768 2406441
TU2669677 True 301 lncRNA 0.41 2 2406046 2406366

Neighbor


gene id symbol gene type direction distance location
LOC118946996 NA coding downstream 6390 2394895 ~ 2399378 (-)
LOC110512130 LOC105009093 coding downstream 140371 2064703 ~ 2265397 (-)
spock3 NA coding downstream 415240 1954337 ~ 1990528 (-)
LOC118947002 LOC105007586 coding downstream 819681 1562205 ~ 1586087 (-)
LOC110515474 NA coding downstream 848212 1498585 ~ 1557714 (-)
LOC110515946 NA coding upstream 94849 2500287 ~ 2583692 (-)
LOC118947017 LOC106570794 coding upstream 99334 2506373 ~ 2585527 (-)
LOC118947018 NA coding upstream 106313 2513352 ~ 2515174 (-)
LOC118947010 NA coding upstream 291800 2698839 ~ 2741820 (-)
G2333605 NA non-coding downstream 25098 2380096 ~ 2380670 (-)
G2333592 NA non-coding downstream 42200 2327282 ~ 2363568 (-)
G2333598 NA non-coding downstream 43862 2358933 ~ 2361906 (-)
G2333594 NA non-coding downstream 57292 2343428 ~ 2348476 (-)
G2333582 NA non-coding downstream 135552 2269973 ~ 2270216 (-)
G2333625 NA non-coding upstream 31964 2439003 ~ 2439569 (-)
G2333517 LOC106596818 non-coding upstream 42212 2449251 ~ 2450468 (-)
G2333520 NA non-coding upstream 44806 2451845 ~ 2453610 (-)
G2333638 NA non-coding upstream 59091 2466130 ~ 2468825 (-)
G2333553 NA other downstream 260751 2137966 ~ 2145017 (-)
G2333429 NA other downstream 663771 1741009 ~ 1741997 (-)
G2333385 NA other downstream 733795 1667991 ~ 1729093 (-)
G2332980 NA other downstream 1202240 1202114 ~ 1203528 (-)
G2333706 NA other upstream 200060 2607099 ~ 2607590 (-)

Expression



Co-expression Network