G2333517 (LOC106596818)


Basic Information

Item Value
gene id G2333517
gene name LOC106596818
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493659.1
NCBI id JAAXML020000263.1
chromosome length 2745910
location 2449251 ~ 2450468 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2669560
GGGTGGATATGCAACTGGTTTAAACCGCTTATTTTACTGACCAATCAAATCACAAGCTCCAAATATAGTCCTTCTCAATTGGCCAGTCCGTTATCTACCACTGTCTCACATTGGCTGTCATCTCTTCATGCCCTTATCCCAATGTCCAATCACCTTGCAGATCCACTTCCTATATTCTTCCCAGTGTCCAATCACCTTGACGATCCAGTTCCTGTATCCCTCTCATTGTCCAATCACCTTGTGTATCCAGGGTGTGAAGGCGGAGACTTTAGTGTAGACGCCAGGTGAGTGTTGCATGCGACAGGAGTGACCCCACGATGTCACACCGTACACTACCCACCCTCCTCCCGGACGCTCACACACCAACGGGCCGCCGCTGTCTCCACGGCAACTGTCCACGCGGCGCTCCGATTGGCCGTCTGTCCCGGCGCAGAGCATGCGGCTAGTGAAGGCTCCGTGGTAACGCTGTTGGCAGTGACgacgggggagaagggagagaggagcctGTTGGAGGGTCTTAGAGTAGGACCGacctggaggacagagagagacgattACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATTAGAGAGACGATTACCATTACACTGGGCATTTAGTCTGTTTAATCAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTACCATTACACTGGGCCTTTAGTCTGTTTAATCAGAGAGACGATTAACATTACACTGGGCCTTTAGTCTGTTTAATTAGACAATTCACATTCAACTGGTCCTTTAATCACCAAcacacccactaacacccccctggccttccacactaaatcacccactaacacccccctcatCTTCCACATTAAATcccccactaacacccccctcatcttccacactaaatcacccactaacacccccctcgTCTTCCACACGAAATTACCCACGAACACCCC

Function

NR:

description
PREDICTED: neurotrypsin-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2669560 True 1218 lncRNA 0.48 1 2449251 2450468

Neighbor

gene id symbol gene type direction distance location
LOC118946996 NA coding downstream 49873 2394895 ~ 2399378 (-)
LOC110512130 LOC105009093 coding downstream 183854 2064703 ~ 2265397 (-)
spock3 NA coding downstream 458723 1954337 ~ 1990528 (-)
LOC118947002 LOC105007586 coding downstream 863164 1562205 ~ 1586087 (-)
LOC110515474 NA coding downstream 891695 1498585 ~ 1557714 (-)
LOC110515946 NA coding upstream 51420 2500287 ~ 2583692 (-)
LOC118947017 LOC106570794 coding upstream 55905 2506373 ~ 2585527 (-)
LOC118947018 NA coding upstream 62884 2513352 ~ 2515174 (-)
LOC118947010 NA coding upstream 248371 2698839 ~ 2741820 (-)
G2333625 NA non-coding downstream 9682 2439003 ~ 2439569 (-)
G2333615 NA non-coding downstream 42212 2405768 ~ 2407039 (-)
G2333605 NA non-coding downstream 68581 2380096 ~ 2380670 (-)
G2333592 NA non-coding downstream 85683 2327282 ~ 2363568 (-)
G2333520 NA non-coding upstream 1377 2451845 ~ 2453610 (-)
G2333638 NA non-coding upstream 15662 2466130 ~ 2468825 (-)
G2333521 NA non-coding upstream 61064 2511532 ~ 2513611 (-)
G2333650 NA non-coding upstream 82744 2533212 ~ 2534533 (-)
G2333553 NA other downstream 304234 2137966 ~ 2145017 (-)
G2333429 NA other downstream 707254 1741009 ~ 1741997 (-)
G2333385 NA other downstream 777278 1667991 ~ 1729093 (-)
G2332980 NA other downstream 1245723 1202114 ~ 1203528 (-)
G2333706 NA other upstream 156631 2607099 ~ 2607590 (-)

Expression


Co-expression Network