Fish Transcriptome and Expression Database

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economic fish

G2334850

Basic Information

Item	Value
gene id	G2334850
gene name	NA
gene type	non-coding
species	rainbow trout (Oncorhynchus mykiss)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	NW_023493660.1
NCBI id	JAAXML020000588.1
chromosome length	1886234
location	1568459 ~ 1606348 (+)
genome version	USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2671450
GGGATTTGTTAtcagcttccaggttagagttctgctccttgaaagcggcagtctTAGCCTTTtcctcagtgtggatgttgcctataatccatggcttctggttgaggtatgtacgtacggtcactgtggggacaacgtcatcaatGCCCTTATTGATGaaaccagtgactgatgtggtgtactcctcaatgccatcggaggagtacaccacatcattcAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU2671450	True	220	lncRNA	0.48	2	1568459	1606348

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
LOC118947021	reep3	coding	upstream	195092	1329818 ~ 1373367 (+)
LOC110515544	LOC106613891	coding	upstream	492480	1066693 ~ 1076882 (+)
LOC110511817	LOC106591225	coding	upstream	566545	1000321 ~ 1002185 (+)
LOC110513287	arid5b	coding	upstream	654434	813079 ~ 914025 (+)
cabcoco1	LOC106604008	coding	upstream	797974	756387 ~ 770485 (+)
LOC110515857	LOC106611092	coding	downstream	88589	1694937 ~ 1736967 (+)
LOC110515110	rgs7	coding	downstream	173093	1779441 ~ 1835837 (+)
G2334848	NA	non-coding	upstream	1037	1566317 ~ 1567422 (+)
G2334819	NA	non-coding	upstream	54240	1513684 ~ 1514219 (+)
G2334818	NA	non-coding	upstream	56764	1511437 ~ 1511695 (+)
G2334817	NA	non-coding	upstream	57448	1510548 ~ 1511011 (+)
G2334811	NA	non-coding	upstream	73070	1494277 ~ 1495389 (+)
G2334877	NA	non-coding	downstream	15153	1621501 ~ 1621926 (+)
G2334880	NA	non-coding	downstream	19729	1626077 ~ 1631223 (+)
G2334883	NA	non-coding	downstream	37500	1643848 ~ 1646642 (+)
G2334885	NA	non-coding	downstream	42823	1649171 ~ 1650059 (+)
G2334890	NA	non-coding	downstream	54660	1661008 ~ 1665915 (+)
G2333977	NA	other	upstream	1084943	483086 ~ 483516 (+)
G2333965	NA	other	upstream	1104468	459378 ~ 463991 (+)

Expression

Co-expression Network