G2334880


Basic Information

Item Value
gene id G2334880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493660.1
NCBI id JAAXML020000588.1
chromosome length 1886234
location 1626077 ~ 1631223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2671491
cagggagcttttgatctcctcaagaatcgttttacatccgcacctatccttgttacacctgacgtctctagacagttcgttgtcgaggttgacgcgtcagaggtgggcgtgggagccattctttctcagcgctccccctctgacgacaaggtccacccttgcgcgtatttttctcatcgcctgtcgccgtcggaacgtaactatgatgtgggaaaccgcgaactgctcgccatccgcttagccctaggcgaatggcgacagtggttggagggggcgaccgttccttttgtcgtttggactgaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggctcgttgggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggctctaagaacaccaagcctgatgctttatctcgtctcttcagttcttcagta

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2671491 True 462 lncRNA 0.53 2 1626077 1631223

Neighbor

gene id symbol gene type direction distance location
LOC118947021 reep3 coding upstream 252710 1329818 ~ 1373367 (+)
LOC110515544 LOC106613891 coding upstream 550098 1066693 ~ 1076882 (+)
LOC110511817 LOC106591225 coding upstream 624163 1000321 ~ 1002185 (+)
LOC110513287 arid5b coding upstream 712052 813079 ~ 914025 (+)
cabcoco1 LOC106604008 coding upstream 855592 756387 ~ 770485 (+)
LOC110515857 LOC106611092 coding downstream 63714 1694937 ~ 1736967 (+)
LOC110515110 rgs7 coding downstream 148218 1779441 ~ 1835837 (+)
G2334877 NA non-coding upstream 4151 1621501 ~ 1621926 (+)
G2334850 NA non-coding upstream 19729 1568459 ~ 1606348 (+)
G2334853 exoc6 non-coding upstream 51562 1571518 ~ 1574515 (+)
G2334848 NA non-coding upstream 58655 1566317 ~ 1567422 (+)
G2334819 NA non-coding upstream 111858 1513684 ~ 1514219 (+)
G2334883 NA non-coding downstream 12625 1643848 ~ 1646642 (+)
G2334885 NA non-coding downstream 17948 1649171 ~ 1650059 (+)
G2334890 NA non-coding downstream 29785 1661008 ~ 1665915 (+)
G2334898 NA non-coding downstream 47756 1678979 ~ 1683630 (+)
G2334899 NA non-coding downstream 49054 1680277 ~ 1684273 (+)
G2333977 NA other upstream 1142561 483086 ~ 483516 (+)
G2333965 NA other upstream 1162086 459378 ~ 463991 (+)

Expression


Co-expression Network