Gene
RNA
| Item | Value |
|---|---|
| gene id | G2335517 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493661.1 |
| NCBI id | JAAXML020000899.1 |
| chromosome length | 1874749 |
| location | 893399 ~ 895932 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dynactin subunit 5 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2672461 | False | 1490 | lncRNA | 0.44 | 7 | 893399 | 895932 |
| TU2672465 | False | 1449 | lncRNA | 0.44 | 6 | 893399 | 895932 |
| TU2672466 | False | 968 | lncRNA | 0.43 | 7 | 893399 | 895932 |
| TU2672471 | False | 1459 | lncRNA | 0.43 | 6 | 893399 | 895932 |
| TU2672484 | False | 1484 | lncRNA | 0.43 | 5 | 893399 | 895932 |
| TU2672458 | False | 1245 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672459 | False | 1666 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672460 | False | 1135 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672463 | False | 1448 | lncRNA | 0.45 | 4 | 893736 | 895932 |
| TU2672464 | False | 1049 | lncRNA | 0.45 | 6 | 893736 | 895932 |
| TU2672467 | False | 1744 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672468 | False | 1283 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672470 | False | 1255 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672472 | False | 677 | lncRNA | 0.45 | 3 | 893736 | 895932 |
| TU2672473 | False | 1080 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672474 | False | 1055 | lncRNA | 0.45 | 7 | 893736 | 895932 |
| TU2672476 | False | 1165 | lncRNA | 0.45 | 6 | 893736 | 895932 |
| TU2672477 | False | 1464 | lncRNA | 0.45 | 6 | 893736 | 895932 |
| TU2672478 | False | 1239 | lncRNA | 0.45 | 7 | 893736 | 895932 |
| TU2672479 | False | 689 | lncRNA | 0.46 | 7 | 893736 | 895932 |
| TU2672480 | False | 1203 | lncRNA | 0.45 | 8 | 893736 | 895932 |
| TU2672481 | False | 1083 | lncRNA | 0.45 | 7 | 893736 | 895932 |
| TU2672482 | False | 1147 | lncRNA | 0.45 | 6 | 893736 | 895932 |
| TU2672483 | False | 832 | lncRNA | 0.45 | 5 | 893736 | 895932 |
| TU2672485 | False | 1021 | lncRNA | 0.45 | 6 | 893736 | 895932 |
| TU2672486 | False | 1501 | lncRNA | 0.45 | 4 | 893736 | 895932 |
| TU2672487 | True | 634 | lncRNA | 0.45 | 4 | 893736 | 895932 |
889,000
890,000
891,000
892,000
893,000
893,000
894,000
895,000
896,000
897,000
NW_023493661.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512628 | cacna1h | coding | upstream | 11839 | 726364 ~ 881560 (+) |
| LOC118947061 | dctn5 | coding | upstream | 537629 | 347081 ~ 355770 (+) |
| LOC110517481 | LOC106592132 | coding | upstream | 562194 | 246524 ~ 331205 (+) |
| LOC110513551 | LOC106594963 | coding | upstream | 663099 | 174502 ~ 230300 (+) |
| ndufab1b | LOC100194699 | coding | downstream | 22347 | 918279 ~ 922732 (+) |
| LOC110515829 | nubp1 | coding | downstream | 410534 | 1306466 ~ 1324492 (+) |
| LOC110511347 | ciita | coding | downstream | 471577 | 1367509 ~ 1389930 (+) |
| LOC110518397 | clec16a | coding | downstream | 544271 | 1440203 ~ 1513308 (+) |
| LOC118947072 | NA | coding | downstream | 619032 | 1514964 ~ 1517005 (+) |
| G2335479 | NA | non-coding | upstream | 7528 | 884003 ~ 885871 (+) |
| G2335497 | NA | non-coding | upstream | 87790 | 805367 ~ 805609 (+) |
| G2335496 | NA | non-coding | upstream | 88459 | 797237 ~ 804940 (+) |
| G2335486 | NA | non-coding | upstream | 118942 | 773066 ~ 774457 (+) |
| G2335520 | NA | non-coding | downstream | 14394 | 910326 ~ 912457 (+) |
| G2335521 | NA | non-coding | downstream | 16137 | 912069 ~ 913025 (+) |
| G2335522 | NA | non-coding | downstream | 19384 | 915316 ~ 916078 (+) |
| G2335532 | NA | non-coding | downstream | 31043 | 926975 ~ 927219 (+) |
| G2335525 | NA | non-coding | downstream | 31503 | 927435 ~ 928885 (+) |
| G2335110 | NA | other | upstream | 747617 | 145257 ~ 145782 (+) |
| G2335108 | NA | other | upstream | 751596 | 134228 ~ 141803 (+) |
| LOC118947070 | cacng2 | other | upstream | 773995 | 78093 ~ 135881 (+) |
| G2335554 | NA | other | downstream | 100846 | 996778 ~ 999193 (+) |
| G2335635 | cacng3 | other | downstream | 316692 | 1212624 ~ 1213369 (+) |
| G2335708 | NA | other | downstream | 625645 | 1521577 ~ 1524881 (+) |
