Gene
RNA
| Item | Value |
|---|---|
| gene id | G2335565 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493661.1 |
| NCBI id | JAAXML020000899.1 |
| chromosome length | 1874749 |
| location | 1024470 ~ 1024972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2672557 | True | 258 | lncRNA | 0.37 | 2 | 1024470 | 1024972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ndufab1b | LOC100194699 | coding | upstream | 101738 | 918279 ~ 922732 (+) |
| LOC110512628 | cacna1h | coding | upstream | 142910 | 726364 ~ 881560 (+) |
| LOC118947061 | dctn5 | coding | upstream | 668700 | 347081 ~ 355770 (+) |
| LOC110517481 | LOC106592132 | coding | upstream | 693265 | 246524 ~ 331205 (+) |
| LOC118947074 | NA | coding | upstream | 815453 | 207706 ~ 209017 (+) |
| LOC110515829 | nubp1 | coding | downstream | 281494 | 1306466 ~ 1324492 (+) |
| LOC110511347 | ciita | coding | downstream | 342537 | 1367509 ~ 1389930 (+) |
| LOC110518397 | clec16a | coding | downstream | 415231 | 1440203 ~ 1513308 (+) |
| LOC118947072 | NA | coding | downstream | 489992 | 1514964 ~ 1517005 (+) |
| LOC110498604 | prkcb | coding | downstream | 560662 | 1585634 ~ 1723846 (+) |
| G2335563 | NA | non-coding | upstream | 6761 | 1017440 ~ 1017709 (+) |
| G2335560 | NA | non-coding | upstream | 11244 | 1013010 ~ 1013226 (+) |
| G2335559 | NA | non-coding | upstream | 13886 | 1010086 ~ 1010584 (+) |
| G2335558 | NA | non-coding | upstream | 14620 | 1009650 ~ 1009850 (+) |
| G2335557 | NA | non-coding | upstream | 16806 | 1007405 ~ 1007664 (+) |
| G2335567 | NA | non-coding | downstream | 1199 | 1026171 ~ 1027017 (+) |
| G2335570 | NA | non-coding | downstream | 4584 | 1029556 ~ 1029820 (+) |
| G2335571 | NA | non-coding | downstream | 5270 | 1030242 ~ 1030599 (+) |
| G2335572 | NA | non-coding | downstream | 5781 | 1030753 ~ 1031115 (+) |
| G2335576 | NA | non-coding | downstream | 18070 | 1043042 ~ 1043314 (+) |
| G2335554 | NA | other | upstream | 25277 | 996778 ~ 999193 (+) |
| LOC110513551 | LOC106594963 | other | upstream | 795749 | 174502 ~ 230300 (+) |
| G2335110 | NA | other | upstream | 878688 | 145257 ~ 145782 (+) |
| G2335108 | NA | other | upstream | 882667 | 134228 ~ 141803 (+) |
| G2335635 | cacng3 | other | downstream | 187652 | 1212624 ~ 1213369 (+) |
| G2335708 | NA | other | downstream | 496605 | 1521577 ~ 1524881 (+) |
