G2337158


Basic Information

Item Value
gene id G2337158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493662.1
NCBI id JAAXML020000566.1
chromosome length 1797194
location 556769 ~ 559716 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2674894
atatatatacagtgttttaacaatggaCAAATGGTTAAGGTATACAACGGAAAATAagtataaatatgggttgtatttacaatggtgtttgttcttcactggttgcccttttctcgtggcaacaggtcacaaatcttgctgctgtgatggcacactgtggtatttcacccagtagttatgggagtttatcaaaattggatttgttttcgaattctttttggatctgtgtaatctgagggaaatatgtctctctaatatggtcatacattgggcaggaggttaggaagtgcagctcagtttccacctcattttgtgggcagtgagcacatagcctgtcttctcttgagagccatgtctgcctacggcggcctttctcaatagcaaggctattctcactgagtctgtacatagtcaaagctttccttaattttgggtcagtcacagtggtcaggtattctgccgctgtgtactctctgtgtagggccaaatagcattctagtttgctctgtttttttgttaattctttccaatgtgtcaagtaattatctttttgttttctcatgatttgcttgggtccaattgtgctgctgtcctggggctctgtagggcgcgtttgtgtttgtgaacagagccccaggaccagcttgcttaggggactcttctccaggttcatctctctgtaggtgatggctttgttgtggaaggtttgtgaatcgcttccttttaggtggttatagaatttaacggctcttttctggattttgatatttagtgggtatcggcctaattctgctctgcatgcattatttggtgttctacgttgtacacagaggatatttttgcagaattctgcgtgcagagtctcaagttggtgtttgtcccattttgtgaagtcttggttggtgagcggaccccagacctcacaaccataaagggcaatgggctctatgactgattcaagtatttttagccaaatcctaattggtatgttgaaatttatgtttctttgatggcatagaatgcccttcttgccttgtctctcagatcgttcacagctttgtggaagttacctgtggcgctgatgtttaggccatggtatgtatagttttttgtgtgctctagggcaacagtgtctagatggaatttgtatttgtggtcctggtgactggaccttttttggaacactattattttggtcttactgagatttactgtcagggcccaggtctgacagaatctgtgcagaagatatTAGGTGCTTCTGTAGGCCCtcattggttggtgacagaagcaccagatcatcagcaaacagcagacatttgacttcggattctagtagggtgaggccgggtgcttcagacttttctagtgcccgcgccaattcgttgatgcatttgttgaagagggtggggcttaagctgcatccctgtctcactccaCGACCCTGTGTAAAGAAAtctgtgttttttgccaattttaaccgcacgcACACTTGCTGTTTTTGTGCATGGATTTCATAATGTCATATGTttcacccccaacaccactttccatctgtttgtatagcagaccctcatgccaaattgagtcgaaggcttttttgaaatcaacaaagcatgagaagactttgcctttgttttggtttgtttggttgtcaattagggtgtgcagggtgaatacatggtctgttgtacggtaatttggtaaaaagccaatttgacatttgctcagtacattttcattgaggaaatgtacgagtctgctgttaatgataatgcagaggattttcccaaggttactgttgacgcatattccacggtagttattggggtcaaatttgtctccacttttgtggattggggtgatcagtccttggttccaaatattggggaagatgccagagctaagtatgatgatAAAGAGTTTTAGTagagccaattggaatttgttgtctgtatatttgatcatttcattgaggataccatcaacaccacaggcctttttgggttggagggtttttcttttgtcctgtaactcattcaatgtaattggagaatccagtgggttctggtagtctttaatagttaattctaagatctgtatttgatcatgtatatgattttgctctttattctttgttatagagccaaaaagattggagaagtggtttacccatacatctcaattttggatagataattattcgtgttgttgtttgttttccaattttcctaGAAGTGGTTAGAgcctatggattcttcaattacattgagctgatttctgacatgctgttccttctttttccgtagtgtatttcagtattgttttagtgattcaccaatagtgaaggcgtagactcaggttttccgggtctctatgtttttggttggacaggtttctcaatttctttcttagatttttgcattcttcatcaaaccatttgtcattgttgttcattttcttcggttttctatttgagatttttagatttgatagggaagctgagaggtcaaatacactgttaagattttctactgccaagtttacaccttcactattacagtggaacgttttacccagggaATTGTCTAAacgggattgaatttgttgtggCCTAAtttttttttggtaggtttccaaactgcattccttccatctattgcatttcttaatgttactcagttcctttggctttgatgcctcatgattgagtattgctctgatcaagtagactgtgatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2674894 True 2740 lncRNA 0.40 2 556769 559716
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516150 LOC106574369 coding downstream 72553 475264 ~ 484216 (-)
LOC110511242 LOC106574369 coding downstream 167244 380868 ~ 389525 (-)
LOC110517700 NA coding downstream 287872 235721 ~ 268897 (-)
LOC110513114 NA coding downstream 309632 235721 ~ 247137 (-)
LOC118947103 NA coding downstream 321789 233976 ~ 234980 (-)
LOC118947100 NA coding upstream 15232 574948 ~ 577333 (-)
LOC110503178 NA coding upstream 41311 545064 ~ 607441 (-)
LOC110511243 LOC106587646 coding upstream 57452 617168 ~ 633645 (-)
LOC118947101 NA coding upstream 90140 649835 ~ 651203 (-)
LOC110518824 NA coding upstream 95022 654738 ~ 659514 (-)
G2336897 NA non-coding downstream 12303 470519 ~ 544466 (-)
G2336988 NA non-coding downstream 15692 539742 ~ 541077 (-)
G2336986 NA non-coding downstream 19830 535993 ~ 536939 (-)
G2337149 NA non-coding downstream 24403 531780 ~ 532366 (-)
G2336982 NA non-coding downstream 26467 461601 ~ 530302 (-)
G2336893 NA non-coding upstream 12096 571812 ~ 572870 (-)
G2337028 NA non-coding upstream 28806 588522 ~ 590145 (-)
G2337170 NA non-coding upstream 54608 614324 ~ 614666 (-)
G2336891 NA non-coding upstream 59866 619582 ~ 699204 (-)
G2337157 LOC106569275 other downstream 4019 552165 ~ 552750 (-)
G2337140 NA other downstream 44875 503438 ~ 511894 (-)
G2337117 NA other downstream 133503 418582 ~ 423266 (-)
G2337114 NA other downstream 152649 401448 ~ 404120 (-)
LOC118947080 LOC106604345 other downstream 405297 145415 ~ 151881 (-)
G2336862 LOC106594727 other upstream 80587 640303 ~ 645610 (-)
G2337195 NA other upstream 181803 741519 ~ 748226 (-)
G2336796 LOC106604345 other upstream 315804 654795 ~ 928702 (-)
G2337292 LOC106584805 other upstream 723101 1282817 ~ 1284774 (-)
G2336998 NA other upstream 955402 1515118 ~ 1516276 (-)

Expression

G2337158 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G2337158 Expression in each Bioproject

Bar chart with 20 bars.
G2337158 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network