XLOC_004226 (BX530032.2)


Basic Information

Item Value
gene id XLOC_004226
gene name BX530032.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 33190658 ~ 33198604 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008076
ttttatttttatctgtACTATGAAGTGAGTTGATGTCAGGTTTGTTCGCTCTCTGCCTCAAGGATGAAGTCTGTCAGATGGAGGACCACTGTGCCAAGCGAGGGCGAAGGCTCGAGTGTGGAGGAG
>TCONS_00008077
CTAAAAATGTCAGCCTTTAGAGTGAATTTTGTCTCCTTGCTGCTCAGTTTCTCCAAACTTTAGCCGGGTAATGATTTTTGGAAGGTAGACTGCTGTGTTTGGGCCAGAGGGGTGCGAGGGAGATCAGGAGGTGCATCATAGGAGGTTTGTTCGCTCTCTGCCTCAAGGATGAAGTCTGTCAGATGGAGGACCACTGTGCCAAGCGAGGGCGAAGGCTCGAGTGTGGAGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117268

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008076 False 126 lncRNA 0.48 2 33190658 33191398
TCONS_00008077 True 231 lncRNA 0.51 2 33190658 33198604

Neighbor

gene id symbol gene type direction distance location
XLOC_004225 NA coding downstream 10863 33163180 ~ 33179795 (-)
XLOC_004224 NA coding downstream 126105 32977282 ~ 33064553 (-)
XLOC_004222 NA coding downstream 247786 32809971 ~ 32942872 (-)
XLOC_004223 NA coding downstream 258031 32930519 ~ 32932627 (-)
XLOC_004221 BX000696.1 coding downstream 453065 32731165 ~ 32737593 (-)
XLOC_004227 NA coding upstream 106528 33305132 ~ 33401476 (-)
XLOC_004228 lims1 coding upstream 399609 33598213 ~ 33618612 (-)
XLOC_004229 NA coding upstream 478230 33676834 ~ 33688949 (-)
XLOC_004230 nxph2b coding upstream 647836 33846440 ~ 33857911 (-)
XLOC_004231 si:ch211-227n13.3 coding upstream 662573 33861177 ~ 33868908 (-)
XLOC_004063 CR854846.1 misc downstream 17062980 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 20498967 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 20568891 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 20599362 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 20677396 12512966 ~ 12513262 (-)
XLOC_004234 CR925698.1 non-coding upstream 767554 33966158 ~ 33966272 (-)
XLOC_004235 NA non-coding upstream 793429 33992033 ~ 33993147 (-)
XLOC_004243 FO681390.1 non-coding upstream 1050852 34249456 ~ 34255220 (-)

Expression


Co-expression Network