LOC110513986 (LOC106595859)


Basic Information

Item Value
gene id LOC110513986
gene name LOC106595859
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493663.1
NCBI id JAAXML020000320.1
chromosome length 1654043
location 712506 ~ 758405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972240.1
cCAGACTGAAGAAGCTCCAGAGAGCCCTTACCAGGCCAGCCTGAACCCCGCCCAGCACCACCCCTCCTCCAGGAAACACACTGCTACACGAGTAGCCCCTTCTGATGACATGGTGCGGTCCAGGGCCCCCCCTCCTGATGACTTGGTGCGGTCCAGGGCCCCCCCTCCAGAAGGAGTGGTCCAGTCTGATGCGTCTAACTCAGAAAGCCCTTCCCACAACATCAAGGACATGATCAGACAGTACCAACACCCATCTAACCCTGCACCCAGccagcctgcacacacacacaggaggggggaggggaagaTGTTTACAAAGAAGCCGGACCCTCATGATGAAGCCATGTATATCCTGAAAGACCAGATGGCCAACCCAccaccacagaagTCTTTCGCTCCGGCGACGCCTCGGGAACCAAAGGAGGAGGGTGGATCCAAAGTAACCAAGGCAACAAAACCCGGCCCACCTGCCCTAGCCGACTCCCACAGcagccccctccccccaccaGtgtcCAGAGTGTTGCCTGTAGAGGAAGAGACCAGCCAGACCCAGCTACACCACAGGAGCAGTGAAGAGCACTACACTTACACTAACACACCCTGGAGGATTTACCTGAGGAAAGaggtgttctacCCTAAAGACAACTTCAACACTCCTCTGTTGCTGGAGCTGCTGTTCAGACAGATAGTCCACGACACCTTCTCAGAGGCCTGCATCCGCATCACTCAGGAGGAGAGGACCAAGATGAAGGCTCTGTTTGtggagcACCAGGTGGGTCAGGATGGAGCCACACAGGATGAGAGTGTGAAGAAGAAGATCGTGACGATGGCTAGAGACTCCTGGGAAATATATTTCTCACGACTCTTCCCTGCCTCGggcagTGTGGGTACTGGGGTGCAGGTGGTCTCTGTGTCTCATCGAGGCATCAAGCTGCTGAAGATGGTGAGAAGCAGCGCTGTTGTCCCAGACTACTTCAGAGTGCTACAcccttacagTTACGCGGACATCCTGTTTGTGTCCATTCCATCTAAGAACATGTTGGAGTTTAACCTGACCAACGAGAAGCTGATTCTGTTCTCCGCCAAGGCTCCACAGGTTAAACACATGGTGGACTACTTCATCACAGAACTGAAGAAgGACTCTGAGTATGTGGTCGCAGTGAGGAACTACATCACAGAGGACAGAACTCTGCTCAGCTTCCACAAGGGAGACATCATCAGATTACACAGCGTGGAGGGGCTGGAGGAGGgctggcGGTACGGGGCGGTGTACGGACGGTGGGGTGTGTTTCCAGGTGAGTGTGTTCAGCCGGTGGCCGCTCCAGACTTTCTGGTTCTCCCTGCTGAGAGGGCGGAGCCTCGTGACAGACACGGCCGTGTTGCCGCCTCCGCTGCAATCGCCGTGGCGATGGGCTCTACAGTCGCCGCCCATGAACTGGACCTCAACACAgaggctgtgGTAGGGTATGGTGAGGACAGCAGCAGTCTCCATCTAGAGGGACTCCCTCTACAGGCCAGTCAGTACACCATGGAGGAGTTCTCCAGGAAGTACTACAGACGGGCTCAGAGACACAGGGACCAGCTGAAGACCAGGAAGGGGAAGGATACCAGAGAACCAGCTGACATGGTTACATACTCTAAGTCCCCTCTCCAGGAGTCTCTGATAGACTTCACAGACAGCAACATGAACAAGGTGGCAGCTGACATCTCCCTGGCTGTGATGAAGTTCATGGGAGACTACCCTCTGAagggacagacagaacaggaccTGGTCTCAACAATCCTAAagctcAGTGGGGAGTATGGTCTGATGAAAGATGAAGCCTACTGCCAGGTGATGAAACAGGTCACAGGAAACACCAGCTCCAAAACggACAGTTGTCAGAGAGGCTGGAGGCTACTCTACATCCTGACTGCGTTCCATCGCTGTTCTGAGGTCCTGAAGCCCTTCCTTTTAACGTTCCTGCTGGACGCCTGCTCTGGTCCTGGAGTCCACTACCAAGGTATAGCCAAGGCGTGTGAGCAGAACCTGAGGAGGACCTTCCAGTACGGAGGAAGAATCGAACACCCCAACAGCATGGAGCTAAAGGCCATGCtgGCTGGGCGGAGCTCCAAGAGACAGTTGTTCCTCCTACCAGGCGGCATCGAGAGACACCTCAAAATCAAGACCTGCtcagtgtctcTGGATGCTATAGAGGAGCTATGTAATGACATGGGACTGCACAGACTGGAGGCCATGGATGAGTACGCTGTATTTGTGGTCACACACCGAGGTCAGAATGTCCGTCCCCTCAATAAGAGGGAGTACATCCTGGACATTACTACGGAAGCGGAGCCAGTGGACAGTAACTACAGCCTGTGGTTCAGGAGGGTCATCTGGACACAGCCGCTTAAATTTGACAACGAGCTCTGTGTCACCATGCATTATAACCAGGTGTTACCAGACTATCTGAAGGCCTTGCTGAGTGTGGTTCCTCAGAGTAAAGCCAGTGAGCAGCAGCTGCAGCAGTTGGCCAAGCTGGCAGCATTACAACACCGTGCTAAAGATACCGTCTTCCTGCCCACCATtgGTGAGGTCCAGGAGTATGTCCCCCCCCAGCTCTACATCAGACAGCCTCCTCAGCCCTGGCTCAACATGGTCACTCAGCATATGCAGCAGGTCTCTCCTCTGAGTCCTCACCAGGCCAGGGCTCAGTTCCTCGGTCTGGTCAGTGCGTTCCCCATGTTTGGTTCCTCCTTCTTCTACATCCAGTCCAGCAGCAACATCTCCATCCTGGCTCCCTGTGTGTTGGCTGTCAACCAGAACGGACTGCACTTCCTACACAAGGACTCACATgaggcCACGGCGCGTTACCCTCTGAATGAGATCCAGTCCACCAGAACCCAGAGACCAACAGGAGGCTCCAGCTCCTCCTATCCCTACGTAGACATTCTGCTGGGAGACCTGCTGACACAGCGAATCACACAGCTGCAGCTGGAacagGGTCTGGAGCTGTGTCGGGTCATTGCCATGCACATGGAAAACATGCTGTCTGTCCGGGAGAAGAGACTCACCCTGCCACCGAGTGAGATCACTCTgttataacacactgtctgtctgtctgtctgtctgtctgccagtcagtcagtcagtcagtcagtcagacagtccgGGAGAAGAGACGTTAGAAGATGGTAGATGGTGGTAGATAGtggtagatggtggtagttagtggtggatggtggtagatgg

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-XV

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972240.1 True 3232 mRNA 0.55 25 712506 758405

Neighbor

gene id symbol gene type direction distance location
LOC118947105 NA coding upstream 283 642875 ~ 712223 (+)
LOC110518409 LOC103147439 coding upstream 69677 542589 ~ 642829 (+)
LOC110514366 drg2 coding upstream 244364 439669 ~ 468142 (+)
LOC110517035 LOC106593794 coding upstream 307899 373646 ~ 404607 (+)
LOC118947111 LOC106592188 coding upstream 347211 357340 ~ 365295 (+)
LOC110516979 llgl1 coding downstream 12804 771209 ~ 871700 (+)
LOC118947106 NA coding downstream 24584 782989 ~ 785506 (+)
LOC110512918 LOC106602080 coding downstream 225883 984288 ~ 1012248 (+)
LOC118947114 NA coding downstream 269029 1026254 ~ 1028187 (+)
LOC118947115 NA coding downstream 271552 1029815 ~ 1031671 (+)
G2337583 NA non-coding upstream 42532 667614 ~ 669974 (+)
G2337580 NA non-coding upstream 52766 659117 ~ 659740 (+)
G2337578 NA non-coding upstream 54409 655298 ~ 658097 (+)
G2337570 NA non-coding upstream 129268 582792 ~ 583238 (+)
G2337566 NA non-coding upstream 134171 573889 ~ 578335 (+)
G2337540 NA non-coding downstream 3433 761838 ~ 762050 (+)
G2337847 NA non-coding downstream 4041 762446 ~ 763064 (+)
G2337849 NA non-coding downstream 5246 763651 ~ 764359 (+)
G2337851 NA non-coding downstream 6461 764866 ~ 767716 (+)
G2337854 NA non-coding downstream 10901 769306 ~ 769592 (+)
G2337538 NA other upstream 159325 551667 ~ 553181 (+)
LOC110516851 LOC103393300 other upstream 378951 303920 ~ 354574 (+)
LOC110513632 LOC106593935 other upstream 527058 165852 ~ 201735 (+)
G2338043 NA other downstream 282555 1040960 ~ 1041498 (+)
G2338054 NA other downstream 312237 1070642 ~ 1083082 (+)
LOC110516613 tnrc18 other downstream 514737 1236948 ~ 1350911 (+)

Expression


Co-expression Network