G2337898


Basic Information

Item Value
gene id G2337898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493663.1
NCBI id JAAXML020000320.1
chromosome length 1654043
location 864686 ~ 865608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2675951
ATTATCTAAGAAGTTTCTCATAAAACATAGTGTTCAAGTAGTctgatatctctctgtcctcagagGATACCCCATTCATCTGAGTGGTAGTctgatatctctctgtcctcagagGATACCCCATTCATCTGAGTGGTAGTctgatatctctctgtcctcagagGATACCCCATTCATCTGAGTGGTAGTctgatatctctctgtcctcagagGATACCCCATTCATCTGAGTGGTAGTctgatatctctctgtcctcagagGATACCCCATTCATCTGAGTGGTAGTcagatatctctctgtcctcagagGATACCCCATTCATCTGAGTGTTAGTCTGATAACAACTCTCTGTCCTCAGAGGATACCCCATTCATCTGAAGTTCCTGAAGTGTGTTGAGTTCCCCTCGCCTCTTTTCCAAATAATAAAAGTGATCTGCTGTTTTCTTCTTTTTGCCCTTTTCACGCCATTGTTTCCTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2675951 True 482 lncRNA 0.44 2 864686 865608

Neighbor

gene id symbol gene type direction distance location
LOC118947106 NA coding upstream 79180 782989 ~ 785506 (+)
LOC110513986 LOC106595859 coding upstream 106281 712506 ~ 758405 (+)
LOC118947105 NA coding upstream 152463 642875 ~ 712223 (+)
LOC110518409 LOC103147439 coding upstream 221857 542589 ~ 642829 (+)
LOC110514366 drg2 coding upstream 396544 439669 ~ 468142 (+)
LOC110512918 LOC106602080 coding downstream 118680 984288 ~ 1012248 (+)
LOC118947114 NA coding downstream 161826 1026254 ~ 1028187 (+)
LOC118947115 NA coding downstream 164349 1029815 ~ 1031671 (+)
LOC110512931 cpsf4 coding downstream 274647 1140255 ~ 1172005 (+)
LOC118947107 NA coding downstream 308216 1172354 ~ 1174397 (+)
G2337881 NA non-coding upstream 55980 808189 ~ 808706 (+)
G2337854 NA non-coding upstream 95094 769306 ~ 769592 (+)
G2337851 NA non-coding upstream 96970 764866 ~ 767716 (+)
G2337849 NA non-coding upstream 100327 763651 ~ 764359 (+)
G2337847 NA non-coding upstream 101622 762446 ~ 763064 (+)
G2337903 NA non-coding downstream 10448 876056 ~ 877079 (+)
G2337857 flii non-coding downstream 16057 881665 ~ 882691 (+)
G2337904 NA non-coding downstream 19307 884915 ~ 885284 (+)
G2337912 NA non-coding downstream 65808 931416 ~ 932429 (+)
G2337914 NA non-coding downstream 80684 946292 ~ 946876 (+)
LOC110516979 llgl1 other upstream 47685 771209 ~ 871700 (+)
G2337538 NA other upstream 311505 551667 ~ 553181 (+)
LOC118947111 LOC106592188 other upstream 504245 357340 ~ 365295 (+)
LOC110516851 LOC103393300 other upstream 531131 303920 ~ 354574 (+)
LOC110513632 LOC106593935 other upstream 679238 165852 ~ 201735 (+)
G2338043 NA other downstream 175352 1040960 ~ 1041498 (+)
G2338054 NA other downstream 205034 1070642 ~ 1083082 (+)
LOC110516613 tnrc18 other downstream 407534 1236948 ~ 1350911 (+)
G2338165 LOC106591863 other downstream 633070 1498678 ~ 1500451 (+)

Expression


Co-expression Network