G2337857 (flii)


Basic Information

Item Value
gene id G2337857
gene name flii
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493663.1
NCBI id JAAXML020000320.1
chromosome length 1654043
location 881665 ~ 882691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2675849
GTATACAGACAGACGGGTGTAGTGTCCAGGCCCTGTATACAGACAGAcgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacGGGTGTAGTGTCCAAGTGTATACAGACAAAcgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacaggtgtagtgtccaggtgtatatagacagacaggtgtagtgtccaggtgtatatagacagacgggtgtagtgtccaggtgtatatagacagacaggtgtaTTGTCCAGGTGTATATATAGCTAGTCCCACCTCTTTGCCATTGTCCAGTAGCATGATGTCATCGTCGGCCAGGTCGTCCTGACAGAAGTCAGAACATTTCTCAGACACGGCGAAGTATCCCTTCTCATTGGAGCAGCGGAACAGTCTGGCGTACTTCATATAGTCAGCGTCCTCGTCGTATACCTTCTGACAGCCAATCCCCACCCAGAAGAAGTTCTCCGGCTCCTCCCCCTCGTTGATCACCTAGGAGACAGGAGCTCCGGGTCAAAGCAGGTTCTTACCATAGAATTATAATGATGTTTATCAGACAAACTGCCTcggtcagaggttccatgttaaccagtcaaactgccacggtcagaggttccatgttaaccagtcaaactgcctcggtcagaggttccatgttaaccagtcaaactgcctcggtcagaggttccatgtt

Function

symbol description
flii Predicted to enable actin filament binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Acts upstream of or within sarcomere organization. Predicted to be active in actin cytoskeleton; cytoplasm; and nucleus. Is expressed in myotome. Orthologous to human FLII (FLII actin remodeling protein).

NR:

description
PREDICTED: protein flightless-1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2675849 True 996 lncRNA 0.49 2 881665 882691

Neighbor

gene id symbol gene type direction distance location
LOC110516979 llgl1 coding upstream 9965 771209 ~ 871700 (+)
LOC118947106 NA coding upstream 96159 782989 ~ 785506 (+)
LOC110513986 LOC106595859 coding upstream 123260 712506 ~ 758405 (+)
LOC118947105 NA coding upstream 169442 642875 ~ 712223 (+)
LOC110518409 LOC103147439 coding upstream 238836 542589 ~ 642829 (+)
LOC110512918 LOC106602080 coding downstream 101597 984288 ~ 1012248 (+)
LOC118947114 NA coding downstream 144743 1026254 ~ 1028187 (+)
LOC118947115 NA coding downstream 147266 1029815 ~ 1031671 (+)
LOC110512931 cpsf4 coding downstream 257564 1140255 ~ 1172005 (+)
LOC118947107 NA coding downstream 291133 1172354 ~ 1174397 (+)
G2337903 NA non-coding upstream 4586 876056 ~ 877079 (+)
G2337898 NA non-coding upstream 16057 864686 ~ 865608 (+)
G2337881 NA non-coding upstream 72959 808189 ~ 808706 (+)
G2337854 NA non-coding upstream 112073 769306 ~ 769592 (+)
G2337851 NA non-coding upstream 113949 764866 ~ 767716 (+)
G2337904 NA non-coding downstream 2224 884915 ~ 885284 (+)
G2337912 NA non-coding downstream 48725 931416 ~ 932429 (+)
G2337914 NA non-coding downstream 63601 946292 ~ 946876 (+)
G2337924 NA non-coding downstream 64989 947680 ~ 949821 (+)
G2337930 NA non-coding downstream 80473 963164 ~ 964178 (+)
G2337538 NA other upstream 328484 551667 ~ 553181 (+)
LOC118947111 LOC106592188 other upstream 521224 357340 ~ 365295 (+)
LOC110516851 LOC103393300 other upstream 548110 303920 ~ 354574 (+)
LOC110513632 LOC106593935 other upstream 696217 165852 ~ 201735 (+)
G2338043 NA other downstream 158269 1040960 ~ 1041498 (+)
G2338054 NA other downstream 187951 1070642 ~ 1083082 (+)
LOC110516613 tnrc18 other downstream 390451 1236948 ~ 1350911 (+)
G2338165 LOC106591863 other downstream 615987 1498678 ~ 1500451 (+)

Expression


Co-expression Network