G2337933


Basic Information

Item Value
gene id G2337933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493663.1
NCBI id JAAXML020000320.1
chromosome length 1654043
location 970602 ~ 970853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2676007
cctcctacctccatacagacacagacaccccCCCTAcctccatacagacagacagacagacacccctcCTACCTCCATACAGATCTGGTAGATCACTAGACAGGCTGTGTGGTTGAACAGTCTGTTCCTCTTCCAGCTGAACTCTACTGATTCCTCCTCTACCTCATGGAGGactggcaaacacacacaaaccacaaatA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2676007 True 200 lncRNA 0.51 2 970602 970853

Neighbor

gene id symbol gene type direction distance location
LOC110516979 llgl1 coding upstream 98902 771209 ~ 871700 (+)
LOC118947106 NA coding upstream 185096 782989 ~ 785506 (+)
LOC110513986 LOC106595859 coding upstream 212197 712506 ~ 758405 (+)
LOC118947105 NA coding upstream 258379 642875 ~ 712223 (+)
LOC110518409 LOC103147439 coding upstream 327773 542589 ~ 642829 (+)
LOC110512918 LOC106602080 coding downstream 13435 984288 ~ 1012248 (+)
LOC118947114 NA coding downstream 56581 1026254 ~ 1028187 (+)
LOC118947115 NA coding downstream 59104 1029815 ~ 1031671 (+)
LOC110512931 cpsf4 coding downstream 169402 1140255 ~ 1172005 (+)
LOC118947107 NA coding downstream 202971 1172354 ~ 1174397 (+)
G2337930 NA non-coding upstream 6424 963164 ~ 964178 (+)
G2337924 NA non-coding upstream 20781 947680 ~ 949821 (+)
G2337914 NA non-coding upstream 23726 946292 ~ 946876 (+)
G2337912 NA non-coding upstream 38173 931416 ~ 932429 (+)
G2337904 NA non-coding upstream 85318 884915 ~ 885284 (+)
G2337934 NA non-coding downstream 799 971652 ~ 978895 (+)
G2337923 NA non-coding downstream 32372 1003225 ~ 1005378 (+)
G2337916 NA non-coding downstream 47699 1018552 ~ 1019039 (+)
G2337538 NA other upstream 417421 551667 ~ 553181 (+)
LOC118947111 LOC106592188 other upstream 610161 357340 ~ 365295 (+)
LOC110516851 LOC103393300 other upstream 637047 303920 ~ 354574 (+)
LOC110513632 LOC106593935 other upstream 785154 165852 ~ 201735 (+)
G2338043 NA other downstream 70107 1040960 ~ 1041498 (+)
G2338054 NA other downstream 99789 1070642 ~ 1083082 (+)
LOC110516613 tnrc18 other downstream 302289 1236948 ~ 1350911 (+)
G2338165 LOC106591863 other downstream 527825 1498678 ~ 1500451 (+)

Expression


Co-expression Network