LOC110511686 (LOC106591320)


Basic Information

Item Value
gene id LOC110511686
gene name LOC106591320
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 52434 ~ 118089 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972331.1
ggtggtggtggtggggggaagGAAAGGATGTATTTCTGCATCAGCGAGTCAAGCAGCTTTGGTCACACCCTTCCCCCGCCTACATGTCCCCCCTCCCGGGACGAGAGAGGAGCTTTACCGCCCGCCATGTTGATAGAGCAGGAGTCAGAGACGTGTAAAAGCCTGCTTAGCGAACTAAACTACACATTACGGGAAGGGTTAGAAAGAACATTTATCCAACAACCACAACAAATAAGTCAACTTTCCTGGTATTTTTGTCTTGGATGGTGACTTCTTTGATCGTATGGGTTGTAAAATTCCTGGATATTCATTTACTCTGTAGAATAACTCGGAAAAAAAGGAAATGgtgatggcgtggctgtgtgtgtgtccagctctgtgtgtgtggagatggTTCTAACAGGCTGTTGTCTGTGAGGACTGTGGAACACACTGCTGGCCTGCGGAGgcaccctgaacacacacacacacactcggtgacaacacacacactcagagacacggtgacacacacacacacacactcagtgacaCGGTGAcacggtgacacacacacactcagtgacaCGGTGACAcggtgacacacacagacacaacgcAGCGAGAACGGATTCGGACACACaaactctccccccctcccccttcccccctaacacacacacacacactcttgactGTGTGTCCCAGTCgtggtagcgtgtgtgtgtgtgtgtgtgtgtgacaccacCACTATGCCGAGCTCCACTATCAGACGTTCTGTGAAGAACATGGTGAACAACTACTCCGACGCGGAGAAGAAGGTGCGGGAGTCCACCTCCAACGACCCCTGGGGCCCCTCGTCCTCTCTGATGTCAGAGGTGGCCGACCTGACCTACAACGTCGTGGCGTTCAGTGAGATCATGAGTATGATCTGGAGACGCCTCAACGACCACGGGAAGAACTGGAGACACGTTTACAAGGCGCTGACGCTGCTCGactacctgattaagACGGGGTCAGAGCGCGTGGCTCTGCAGTGTAAAGAGAACATCTTCGCCATCCAGACTCTGAAGGACTTTCAGTACATAGACAGAGACGGAAAAGACCAGGGAATCAACGTCAGAGAGAAGAGCAAACAGCTGGTGGTCCTGTTGAAAGATGAGGAGAGACtgaaagGTGAGCGTTCCCAGGCTCTGAAGACGAAGGAGAGGATGGCTCAGGTCACCACTACAGGGGCGGTGACACCGGGTCAGGGTTTTGGCCGAGGTTCGTCTCAACCCAACCTGTCGACCTCCTACAGCGAGGAGTACGGCAAGTCGGAGGGGTCACCTGCATCTTACCACGGCTccacgTCTCCGGTTCCAGGCTCAGAGTTGGAGCAGGCCCGCCCCCAGACCAGCGGAGAGGAGGAGCTACAGCTGCAGCTAGCCCTGGCCATGAGCAGAGAGGCTGCTgaacaggaggACAGGATGCGTCGGGGAGATGACCTGAGACTCCAGATGGCACTCGAGGAGAGTCGTAAAGGAAAAGCCCTCGGTGATACCGGCTCTGGAAAACTAgccaagaagaagagagagcaggcccagtcctctctgttGGATCTGATGGATGTTCCAGAATCGGATACGGCCGACCCCTGGGGGGCGAGAGGAGGCGCTGCCGCCGCACCAGACCCCTGGCAGGcctacggTGCAGCCCCAACGCCAGTGGCTCCAGTAGACCCCTGGGGGCCCCCGtcctcctctgttccccccatgaaGAGCAGTGATCCCTGGGGAACCAACCCTGCTCCTGACCCCTGGGGTTCTGGAGGAACCTCCTACGcagGTGATGGTCGGGGTCTCTCCTCCCTGACTAGTGGTACCGGGGACCTGTTTGACCCTCTGCCCAACAGGAAGACCCCAGAGTCCTTCCTGGGTCCTAATGCAGCATTGGTCAACCTGGACTCACTGGTCACCAAGCCTCCTCAGCCTGCTCCTATTGTCAACCCCTTCCTCGCTGCCGCAGGAGCCGCCCCTGTAGCCGCCCCCCAGGCCAACCCCTTCCAGATGGGCCAGCCTAACCCCCCTACCCTAAACCAGATGAGAGTCAGCCCTATGCCAGGCCTGAGTCTGGGAGGGGGAGCAGGGTTCAGCAGCTTGTCCTCCATGGTAGACCCTCTGCCCCCCCTGACGGGCCACATGGTGCCcggggttggagggatggggggtTTCCCGGCCTCTATGCCTCTGACCCAGCCCCTCTTCGGCTCAGCTCTGCCCCCCACAGCTGGCACACAGCCCCCCGGGACCACTAACCCCTTCTTGTTGTGAGGAACGCCtcaactacacccccccccccccccccccaacaagacAACACCCCTGGACTCCTCTCCTGTTtt
>TU2677097
CGGGGTCTCTCCTCCCTGACTAGTGGTACCGGGGACCTGTTTGACCCTCTGCCCAACAGGAAGACCCCAGAGTCCTTCCTGGGTCCTAATGCAGCATTGGTCAACCTGGACTCACTGGTCACCAAGCCTCCTCAGCCTGCTCCTATTGTCAACCCCTTCCTCGCTGCCGCAGGAGCCGCCCCTGTAGCCGCCCCCCAGGCCAACCCCTTCCAGATGGGCCAGCCTAACCCCCCTACCCTAAACCAGATGAGAGTCAGCCCTATGCCAGGCCTGAGTCTGGGAGGGGGAGCAGGGTTCAGCAGCTTGTCCTCCATGGTAGACCCTCTGCCCCCCCTGACGGGCCACATGGTGCCcggggttggagggatggggggtTTCCCGGCCTCTATGCCTCTGACCCAGCCCCTCTTCGGCTCAGCTCTGCCCCCCACAGCTGGCACACAGCCCCCCGGGACCACTAACCCCTTCTTGTTGTGAGGAACGCCtcaactacacccccccccccccccccccaacaagacAACACCCCTGGACTCCTCTCCTGTTtttccaccccccctctcctcttcctccctcttcctctctctcttcctctctcccctctgctcttcctctctctcttcctctctctcttcctctctcccctctgctcttcccctctccactctgctcttcccctctccactctgctcttcctctctcccctctccctctctgttctctctctcctcttcctttctctctctcctcttcctttctctctctcctcttcctttctctctctctcctctttctttctctctcctctctctcctcttcctctctctcctcttcctctctctcctctcccctcttcctctctctcctctcccctcttcctctctcccctctgctcttcctctctctctcctcttcctctctctcctcttctcttcctctctcctctccctctgtcttatATCAGATACTGTATCCTGTAGACAGTATTCCTGGCTGTTCTGACTGTTTTTAATGCTAGTCTGATCATAGAGTGAATCTAACTAAACTTGTACaaccccaggtgtgtgtgtgtgtactaagcAGGGATTTTGCACATGCTTAATTAGCTGTGACTGTTGCTTCACCGTTAGTCCTTAGCTGGAGACGACTCCACTGCCAGGTACACTGTGTTACTACCCCCCCCACCCCGTTACCGGCCACAACTTGTGAGGTCACTGCTTAGCGACCTATGACCCTGACACACAGCCACATGTGaattt

Function

NR:

description
PREDICTED: epsin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972331.1 False 2362 mRNA 0.58 10 53145 118089
TU2677097 True 1259 TUCP 0.57 2 52434 55362

Neighbor

gene id symbol gene type direction distance location
LOC118947117 NA coding downstream 4845 47623 ~ 51453 (-)
prpsap2 LOC103393631 coding upstream 129262 247351 ~ 293320 (-)
LOC110511701 traf7 coding upstream 328411 446215 ~ 512472 (-)
LOC110517482 fscn1 coding upstream 662677 780766 ~ 808870 (-)
LOC118947119 NA coding upstream 681074 799163 ~ 800016 (-)
LOC110516334 LOC106594246 coding upstream 737273 855362 ~ 958479 (-)
G2338431 NA non-coding downstream 10052 42428 ~ 43093 (-)
G2338426 NA non-coding downstream 18025 26748 ~ 35120 (-)
G2338611 NA non-coding upstream 21158 139247 ~ 139794 (-)
G2338612 NA non-coding upstream 45166 163255 ~ 163543 (-)
G2338596 NA non-coding upstream 54930 173019 ~ 174054 (-)
G2338614 NA non-coding upstream 56445 174534 ~ 174778 (-)
G2338616 NA non-coding upstream 60105 178194 ~ 178476 (-)
G2338590 NA other upstream 66288 184377 ~ 186655 (-)
G2338672 NA other upstream 260090 378179 ~ 378883 (-)
G2338725 NA other upstream 451738 569827 ~ 570378 (-)
G2338752 NA other upstream 545448 663537 ~ 666097 (-)
G2338585 NA non-coding upstream 960 56322 ~ 56588 (-)
G2338586 NA non-coding upstream 1326 56688 ~ 57377 (-)
G2338601 NA non-coding upstream 46052 101414 ~ 102762 (-)

Expression


Co-expression Network