grapa (LOC106602037)


Basic Information

Item Value
gene id grapa
gene name LOC106602037
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 146033 ~ 184015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972315.1
tctctctcgctctctttctctcactctctcattgtggtgagtagcagtagcagcagcactaGTTGTCTCATGGAACTCAGTCAGGCAAATgaccattctcctctctcctcctctcttctcctctctactcctctctcctcctctcttctcctcctctctcctcctctcttcttctcctgctgTTTTCTCTCTGCTCAGAGGTAGTGGAAAATCTATtgctcctttcttctcttctcctcctctcttctcctctctcctcctctcttttcctctctcctcctctctcctctcgtccccctcTCACCCCTTGAGCTGGGGGTCAGTGGGGCTctctgtgtgtgagggagggagggggggggggttcaggatGGAAGCGATGGCTCTCTATTCGTTCCGAGCCACGGAGGGTGATGAGCTCAGTTTCAACAAGGGAGACGTACTTAAGgtcatCAACATGGAAGATGATCCTAACTGGTACACAGCGGAGCTCAACAACAAGAAAGGATACGTACCCAAAAACTATATCAATCTGAGACCACACgcGTGGTTCGCAGGCCGTGTATCCAGGGGGGTTGCAGAGGGCAGATTGAGGCAGAGAGACCGAGGAGCGTTCAtcgtgagagagagcgagagcgctcCAGGAGAATTCTCCATGTCcgtcagTTACGGGGACCATGTGCAGCACTTCAAGGTGCTCCAGGACAGGTCAGGACAGTACTTTGTTTGGGAGGAGATGTTCTTCTCTCTGAATCAGATGGTGGAGTTTTACCATAGCAACAGCATCGCCAAGGAGGGAACCGTCTTCCTACGAGACCCAGAACACAATGCCAGGCACCCCCACCACGCCCATGCTCTGTTTGACTTcaccccccaccacccctcccaGCTACGCTTCCTCCGCGGTGATTTCATCGACCTGCTCGACTGTTCCGATCCGCTGCGCTGGAGAGGCCGTTGTCATGGACGCGTTGGATTCTTCCCCCCGGAGTATGTCCAGGCTGTCTACCAATGACCCCGCCCCATCTACAACGGACCCCGCCCGATCTACAACGGACCCCGCCCCCATTTGCCCCGCCCCATCTACATGGACCCCACCCCCATCTGCCCTGCCCCCATCTACAACGGACCCCGCCCCATCTACAACGGACCCCACCCCCATCTGCCCTGCCCCCATCTACAACGGACTCCACCCCATCTACAACGGACCCCGCCCCATCTAGAACGGACCCCGTCCCATCTACAACGGACCCCGCCCCTATCTGCCCCGCCCCATCTAC
>XM_036972316.1
tctctcgctctctttctctcactctctcattgtggtgagtagcagtagcagcagcactaGTTGTCTCATGGAACTCAGTCAGGCAAATgaccattctcctctctcctcctctcttctcctctctactcctctctcctcctctcttctcctcctctctcctcctctcttcttctcctgctgTTTTCTCTCTGCTCAGAGGTAGTGGAAAATCTATtgctcctttcttctcttctcctcctctcttctcctctctcctcctctcttttcctctctcctcctctctcctctcgtccccctcTCACCCCTTGAGCTGGGGGTCAGTGGGGCTctctgtgtgtgagggagggagggggggggggttcaggatGGAAGCGATGGCTCTCTATTCGTTCCGAGCCACGGAGGGTGATGAGCTCAGTTTCAACAAGGGAGACGTACTTAAGgtcatCAACATGGAAGATGATCCTAACTGGTACACAGCGGAGCTCAACAACAAGAAAGGATACGTACCCAAAAACTATATCAATCTGAGACCACACgcGTGGTTCGCAGGCCGTGTATCCAGGGGGGTTGCAGAGGGCAGATTGAGGCAGAGAGACCGAGGAGCGTTCAtcgtgagagagagcgagagcgctcCAGGAGAATTCTCCATGTCcgtcagTTACGGGGACCATGTGCAGCACTTCAAGGTGCTCCAGGACAGGTCAGGACAGTACTTTGTTTGGGAGGAGATGTTCTTCTCTCTGAATCAGATGGTGGAGTTTTACCATAGCAACAGCATCGCCAAGGAGGGAACCGTCTTCCTACGAGACCCAGAACACAATGCCAGGGTCTAACCCTCTCCTGGACCCCCCCTCCAGCACCCCCACCACGCCCATGCTCTGTTTGACTTcaccccccaccacccctcccaGCTACGCTTCCTCCGCGGTGATTTCATCGACCTGCTCGACTGTTCCGATCCGCTGCGCTGGAGAGGCCGTTGTCATGGA

Function

NR:

description
PREDICTED: GRB2-related adapter protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972315.1 False 1277 mRNA 0.57 5 146033 184015
XM_036972316.1 True 992 mRNA 0.55 5 146035 183702

Neighbor

gene id symbol gene type direction distance location
LOC118947124 b9d1 coding upstream 99146 40792 ~ 46887 (+)
LOC118947116 fam83g coding downstream 17732 201747 ~ 219513 (+)
LOC110516853 LOC106579185 coding downstream 117760 301775 ~ 437126 (+)
LOC118947125 NA coding downstream 345970 465511 ~ 562271 (+)
LOC118947126 rpusd1 coding downstream 495438 679453 ~ 693043 (+)
LOC110511299 LOC106591863 coding downstream 519468 703483 ~ 758282 (+)
G2338466 NA non-coding upstream 7480 138343 ~ 138553 (+)
G2338465 NA non-coding upstream 7824 137151 ~ 138209 (+)
G2338434 NA non-coding upstream 94114 47436 ~ 51919 (+)
G2338421 NA non-coding upstream 112037 21768 ~ 33996 (+)
G2338461 NA non-coding downstream 1133 185148 ~ 186524 (+)
G2338480 NA non-coding downstream 5166 189181 ~ 189442 (+)
G2338482 NA non-coding downstream 8205 192220 ~ 192452 (+)
G2338487 NA non-coding downstream 19618 203633 ~ 203832 (+)
G2338489 NA non-coding downstream 22660 206675 ~ 210159 (+)
G2338488 NA other downstream 21167 205182 ~ 206228 (+)

Expression


Co-expression Network