prpsap2 (LOC103393631)


Basic Information

Item Value
gene id prpsap2
gene name LOC103393631
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 247351 ~ 293320 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972342.1
GACGTGATGACGTCTTCCCTCTACGATCAACACGAGGGTTTGGGTGACATTTTTTAATCGTCGGGATTCCTGGTCTGTGATTGGCCGAGACGCCTTGTCCATCATACTCAGTAGACCGGGCTTGGAGGAACAGGTTGAGACGTTTACAAACTGCGAAATCATTCAACATCATTGAACGCGGTTACACTACAAAAAACAAACTGGAAGGGCTGAGTGCAGCGTGGGTGCCCAGGGATAGGCCGTCTGAGGCTGGGGAGCAGAGTGGCCGGTCCCCCCCGGTTATGAACCACACAGAGGGAGGCCTGGTCATCTTCAGCGCCAACTCACACCCCTCCTCCAGGGAGATCAGCAAGAGGATAGGagaGCGTCTGGGGGTGGAGCTTGGGAAGGTGCAGGTGTACCAGGAAGACAATAGAGaAACGCGTGTGCAGATCCAGGAGTCGGTTCGAGGCAAAGATGTCTTCATCATCCAGACAGTGTCTAAggatgtgaacaCTACCATCATGGAGTTGTTGATCATGGTGTATGCGTGCAGGACTTCCTGTGCCAGGAGTATCACCGGGGTGGTCCCCTACTTCCCTTACAGTAAACAGTGTAAGATGAGGAAGAGAGGGTCTATCGTCTCCAAGCTGCTGGCCTCCATGATGTGTAAAGCTGGTCTGACCCATCTCATCACTATGGATCTTCATCAGAAGGAGATTCAGGGCTTCTTCAACATCCCAGTAGACAACCTGAGAGCTTCTCCCTTCCTACTGCagtacatacaggaggagATTCCTGACTATAGAAACGCAGTGATAGTGGCCAAATCTCCAGCCTCAGCCAAAAGggcccAGTCGTTTGCAGAGCGGTTGCGTCTGGGTATTGCAGTGATCCATGGAGAGGCTCAGGATGCAGAGTCAGACCTGGTGGATGGAAGACACTCCCCTCCTACTGTCAAGATaccactgttgATCCCTAAAGAGAAGCCTCCCATCACAGTGGTAGGAGACGTAGGAGGACGCATCGCCATCATAGTgGATGACATCATCGATGACGTGGACAGTTTCGTGGCGGCCGCGGAGACGTTGAAGAAGCACGGAGCGTACAAGATATTCGTCATGGCGACGCACGGCATCCTCTCCTCCGATGCACCGAAACTCATAGAGGAATCTGCCATCGAcaaggtggtggTAACCAACACTATTCCTCATGAGCATCAGAAGCTGCAGTGTGTTAAGATCCAGACGGTGGACATCAGCCTGATCCTCTCTGAAGCCATCAGACGAATCTACAACGGAGAGAGCATGTCCTACCTGTTCAGACACATCGGACTGgaggactgaacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972342.1 True 1380 mRNA 0.52 11 247351 293320

Neighbor

gene id symbol gene type direction distance location
LOC110511686 LOC106591320 coding downstream 129262 52434 ~ 118089 (-)
LOC118947117 NA coding downstream 199051 47623 ~ 51453 (-)
LOC110511701 traf7 coding upstream 153180 446215 ~ 512472 (-)
LOC110517482 fscn1 coding upstream 487446 780766 ~ 808870 (-)
LOC118947119 NA coding upstream 505843 799163 ~ 800016 (-)
LOC110516334 LOC106594246 coding upstream 562042 855362 ~ 958479 (-)
LOC110513313 slc29a4 coding upstream 680421 973741 ~ 1003184 (-)
G2338597 NA non-coding downstream 4930 242116 ~ 242421 (-)
G2338632 NA non-coding downstream 20206 226946 ~ 227145 (-)
G2338629 LOC106602036 non-coding downstream 32667 214343 ~ 214684 (-)
G2338630 NA non-coding downstream 33211 213453 ~ 214140 (-)
G2338627 NA non-coding downstream 35775 211300 ~ 211576 (-)
G2338663 NA non-coding upstream 68251 361571 ~ 361823 (-)
G2338664 NA non-coding upstream 68564 361884 ~ 362185 (-)
G2338668 NA non-coding upstream 79255 372575 ~ 372872 (-)
G2338669 NA non-coding upstream 82331 375651 ~ 375942 (-)
G2338671 NA non-coding upstream 84397 377717 ~ 377946 (-)
G2338590 NA other downstream 60696 184377 ~ 186655 (-)
G2338672 NA other upstream 84859 378179 ~ 378883 (-)
G2338725 NA other upstream 276507 569827 ~ 570378 (-)
G2338752 NA other upstream 370217 663537 ~ 666097 (-)
G2338753 NA other upstream 370908 664228 ~ 664685 (-)

Expression


Co-expression Network